Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005639425.1 |
| length | 1057 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 4 |
| gene id | LOC120560111 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 31478501 ~ 31485001 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU88421 | lncRNA | upstream | 60241 | 31409955 ~ 31418260 (+) | True | G66107 |
| TU88405 | lncRNA | upstream | 69345 | 31351198 ~ 31409156 (+) | False | G66092 |
| TU88404 | lncRNA | upstream | 69345 | 31403719 ~ 31409156 (+) | True | G66092 |
| TU88374 | lncRNA | upstream | 160027 | 31317576 ~ 31318474 (+) | True | G66069 |
| TU88479 | lncRNA | downstream | 274187 | 31759188 ~ 31763725 (+) | True | LOC120561307 |
| XR_005639580.1 | lncRNA | downstream | 277985 | 31762986 ~ 31763773 (+) | False | LOC120561307 |
| TU88608 | lncRNA | downstream | 721918 | 32206919 ~ 32209511 (+) | False | adamts3 |
| TU88639 | lncRNA | downstream | 764000 | 32249001 ~ 32249240 (+) | True | G66253 |
| TU88641 | lncRNA | downstream | 805771 | 32290772 ~ 32291019 (+) | True | G66255 |
| XM_039804031.1 | mRNA | upstream | 17057 | 31456500 ~ 31461444 (+) | True | LOC120561065 |
| XM_039803436.1 | mRNA | upstream | 162079 | 31315299 ~ 31316422 (+) | True | LOC120560681 |
| XM_039803819.1 | mRNA | upstream | 178056 | 31273898 ~ 31300445 (+) | True | hs3st1l2 |
| XM_039803820.1 | mRNA | upstream | 178056 | 31297404 ~ 31300445 (+) | False | hs3st1l2 |
| XM_039802031.1 | mRNA | upstream | 237461 | 31237268 ~ 31241040 (+) | True | LOC120559964 |
| XM_039802281.1 | mRNA | downstream | 62 | 31485063 ~ 31489526 (+) | True | LOC120560109 |
| XM_039802283.1 | mRNA | downstream | 62 | 31485063 ~ 31489526 (+) | False | LOC120560109 |
| XM_039803521.1 | mRNA | downstream | 28307 | 31513308 ~ 31565163 (+) | True | LOC120560726 |
| XM_039803081.1 | mRNA | downstream | 85041 | 31570042 ~ 31660267 (+) | True | dapk1 |
| XM_039804358.1 | mRNA | downstream | 185524 | 31670525 ~ 31675115 (+) | True | ctsla |
| TU88223 | other | upstream | 592336 | 30857580 ~ 30886165 (+) | False | LOC120561064 |
| TU88162 | other | upstream | 900342 | 30574086 ~ 30578159 (+) | True | G65899 |
| TU88039 | other | upstream | 1226982 | 30247983 ~ 30251519 (+) | True | LOC120560820 |
| TU88040 | other | upstream | 1228233 | 30247939 ~ 30250268 (+) | False | LOC120560820 |
| TU88038 | other | upstream | 1228261 | 30246887 ~ 30250240 (+) | False | LOC120560820 |
| XR_005639593.1 | other | downstream | 324631 | 31809632 ~ 31810279 (+) | False | dmrt3a |
| TU88617 | other | downstream | 641292 | 32126293 ~ 32136966 (+) | True | G66231 |
| TU88642 | other | downstream | 837506 | 32322507 ~ 32329990 (+) | True | G66256 |
| TU88651 | other | downstream | 879859 | 32364860 ~ 32369984 (+) | True | G66263 |
| unassigned_transcript_266 | other | downstream | 1086687 | 32571688 ~ 32571759 (+) | True | trnap-ugg |
