Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00002806 |
| length | 1221 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | XLOC_000032 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 1571847 ~ 1578251 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0042737 | drug catabolic process | biological_process |
| GO:0042738 | exogenous drug catabolic process | biological_process |
| GO:0019265 | glycine biosynthetic process, by transamination of glyoxylate | biological_process |
| GO:0006082 | organic acid metabolic process | biological_process |
| GO:0009074 | aromatic amino acid family catabolic process | biological_process |
| GO:0042493 | response to drug | biological_process |
| GO:0017144 | drug metabolic process | biological_process |
| GO:0046395 | carboxylic acid catabolic process | biological_process |
| GO:0009410 | response to xenobiotic stimulus | biological_process |
| GO:0043436 | oxoacid metabolic process | biological_process |
| GO:0044281 | small molecule metabolic process | biological_process |
| GO:0044282 | small molecule catabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0071466 | cellular response to xenobiotic stimulus | biological_process |
| GO:0006805 | xenobiotic metabolic process | biological_process |
| GO:0006570 | tyrosine metabolic process | biological_process |
| GO:0006572 | tyrosine catabolic process | biological_process |
| GO:0019752 | carboxylic acid metabolic process | biological_process |
| GO:0016054 | organic acid catabolic process | biological_process |
| GO:0008395 | steroid hydroxylase activity | molecular_function |
| GO:0004760 | serine-pyruvate transaminase activity | molecular_function |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | molecular_function |
| GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen | molecular_function |
| GO:0004180 | carboxypeptidase activity | molecular_function |
| GO:0004497 | monooxygenase activity | molecular_function |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0008453 | alanine-glyoxylate transaminase activity | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0046906 | tetrapyrrole binding | molecular_function |
| GO:0046914 | transition metal ion binding | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008235 | metalloexopeptidase activity | molecular_function |
| GO:0008238 | exopeptidase activity | molecular_function |
| GO:0008241 | peptidyl-dipeptidase activity | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003011 | lncRNA | upstream | 211016 | 1358897 ~ 1360831 (+) | True | XLOC_000031 |
| TCONS_00003010 | lncRNA | upstream | 211396 | 1358731 ~ 1360451 (+) | False | XLOC_000031 |
| TCONS_00003009 | lncRNA | upstream | 229610 | 1315289 ~ 1342237 (+) | True | XLOC_000030 |
| TCONS_00003008 | lncRNA | upstream | 249894 | 1315289 ~ 1321953 (+) | False | XLOC_000030 |
| TCONS_00003007 | lncRNA | upstream | 538209 | 1015812 ~ 1033638 (+) | False | XLOC_000028 |
| TCONS_00003014 | lncRNA | downstream | 40813 | 1617203 ~ 1619314 (+) | False | XLOC_000034 |
| TCONS_00003013 | lncRNA | downstream | 40813 | 1617203 ~ 1619314 (+) | False | XLOC_000034 |
| TCONS_00003012 | lncRNA | downstream | 40813 | 1617203 ~ 1619314 (+) | True | XLOC_000034 |
| TCONS_00000064 | lncRNA | downstream | 113657 | 1690047 ~ 1691025 (+) | False | XLOC_000035 |
| TCONS_00000065 | lncRNA | downstream | 128740 | 1705130 ~ 1705880 (+) | True | XLOC_000035 |
| TCONS_00000059 | mRNA | upstream | 600896 | 961607 ~ 970951 (+) | True | XLOC_000027 |
| TCONS_00000058 | mRNA | upstream | 963600 | 604127 ~ 608247 (+) | True | XLOC_000025 |
| TCONS_00000057 | mRNA | upstream | 963792 | 594736 ~ 608055 (+) | False | XLOC_000025 |
| TCONS_00000056 | mRNA | upstream | 968450 | 594584 ~ 603397 (+) | False | XLOC_000025 |
| TCONS_00000054 | mRNA | upstream | 980516 | 580642 ~ 591331 (+) | False | XLOC_000023 |
| TCONS_00000062 | mRNA | downstream | 23589 | 1599979 ~ 1614500 (+) | True | XLOC_000033 |
| TCONS_00000063 | mRNA | downstream | 113385 | 1689775 ~ 1706159 (+) | False | XLOC_000035 |
| TCONS_00000066 | mRNA | downstream | 135750 | 1712140 ~ 1731564 (+) | False | XLOC_000036 |
| TCONS_00000072 | mRNA | downstream | 212967 | 1789357 ~ 1796832 (+) | False | XLOC_000036 |
| TCONS_00000074 | mRNA | downstream | 228904 | 1805294 ~ 1815660 (+) | True | XLOC_000037 |
| TCONS_00000060 | other | upstream | 353042 | 1218691 ~ 1218805 (+) | True | XLOC_000029 |
| TCONS_00000053 | other | upstream | 995326 | 576444 ~ 576521 (+) | True | XLOC_000024 |
| TCONS_00000052 | other | upstream | 1025630 | 537589 ~ 546217 (+) | False | XLOC_000023 |
| TCONS_00000047 | other | upstream | 1056525 | 514013 ~ 515322 (+) | True | XLOC_000021 |
| TCONS_00000036 | other | upstream | 1277953 | 260040 ~ 293894 (+) | False | XLOC_000017 |
| TCONS_00000067 | other | downstream | 135763 | 1712153 ~ 1718527 (+) | False | XLOC_000036 |
| TCONS_00000068 | other | downstream | 141307 | 1717697 ~ 1723157 (+) | False | XLOC_000036 |
| TCONS_00000069 | other | downstream | 142221 | 1718611 ~ 1793371 (+) | False | XLOC_000036 |
| TCONS_00000070 | other | downstream | 142817 | 1719207 ~ 1732326 (+) | False | XLOC_000036 |
| TCONS_00000094 | other | downstream | 614310 | 2190700 ~ 2214397 (+) | False | XLOC_000046 |
