Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117598034 |
| length | 640 |
| RNA type | C_region |
| GC content | 0.51 |
| exon number | 2 |
| gene id | LOC117598034 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 6841937 ~ 6843964 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU170960 | lncRNA | upstream | 11871 | 6783338 ~ 6830066 (+) | False | G144353 |
| TU170983 | lncRNA | upstream | 13934 | 6824401 ~ 6828003 (+) | True | G144361 |
| TU170981 | lncRNA | upstream | 15029 | 6807971 ~ 6826908 (+) | True | G144359 |
| XR_004578857.1 | lncRNA | upstream | 26001 | 6813767 ~ 6815936 (+) | False | LOC117598166 |
| XR_004578858.1 | lncRNA | upstream | 27099 | 6813294 ~ 6814838 (+) | True | LOC117598166 |
| TU170973 | lncRNA | downstream | 24450 | 6868414 ~ 6908667 (+) | False | G144353 |
| XR_004578856.1 | lncRNA | downstream | 27168 | 6871132 ~ 6874093 (+) | True | LOC117598165 |
| TU170990 | lncRNA | downstream | 28855 | 6872819 ~ 6899792 (+) | False | LOC117598165 |
| XR_004578860.1 | lncRNA | downstream | 32262 | 6876226 ~ 6877268 (+) | True | LOC117598168 |
| TU171008 | lncRNA | downstream | 88616 | 6932580 ~ 6933301 (+) | True | G144382 |
| XM_026947362.2 | mRNA | upstream | 108023 | 6692793 ~ 6733914 (+) | False | LOC113547131 |
| XM_026947363.2 | mRNA | upstream | 108023 | 6698312 ~ 6733914 (+) | True | LOC113547131 |
| XM_034307439.1 | mRNA | upstream | 161768 | 6679484 ~ 6680169 (+) | True | LOC117598051 |
| XM_026947355.2 | mRNA | upstream | 162611 | 6605821 ~ 6679326 (+) | True | LOC113547127 |
| XM_026947313.2 | mRNA | upstream | 248377 | 6587367 ~ 6593560 (+) | False | LOC113547098 |
| XM_034307653.1 | mRNA | downstream | 409356 | 7253320 ~ 7264696 (+) | False | LOC113529730 |
| XM_034307652.1 | mRNA | downstream | 409357 | 7253321 ~ 7264696 (+) | True | LOC113529730 |
| XM_034307651.1 | mRNA | downstream | 409357 | 7253321 ~ 7264696 (+) | False | LOC113529730 |
| XM_026918781.2 | mRNA | downstream | 538114 | 7382078 ~ 7400425 (+) | True | LOC113529540 |
| XM_034307142.1 | mRNA | downstream | 545535 | 7389499 ~ 7400424 (+) | False | LOC113529540 |
| LOC117598033 | other | upstream | 2517 | 6837055 ~ 6839420 (+) | True | LOC117598033 |
| LOC113529732 | other | upstream | 7488 | 6830592 ~ 6834449 (+) | True | LOC113529732 |
| TU170969 | other | upstream | 43033 | 6779989 ~ 6798904 (+) | False | G144353 |
| LOC117598156 | other | upstream | 43033 | 6796972 ~ 6798904 (+) | True | LOC117598156 |
| LOC113547145 | other | upstream | 56500 | 6783516 ~ 6785437 (+) | True | LOC113547145 |
| LOC117598035 | other | downstream | 11226 | 6855190 ~ 6856803 (+) | True | LOC117598035 |
| TU170952 | other | downstream | 11465 | 6855429 ~ 6856856 (+) | False | G144353 |
| TU170968 | other | downstream | 18743 | 6862707 ~ 6870576 (+) | False | G144353 |
| LOC117598164 | other | downstream | 25295 | 6869259 ~ 6870503 (+) | True | LOC117598164 |
| LOC113529731 | other | downstream | 36693 | 6880657 ~ 6882164 (+) | True | LOC113529731 |
