Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU167464 |
| length | 567 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G141643 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 207325 ~ 260961 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU167454 | lncRNA | upstream | 1460 | 205631 ~ 205865 (+) | True | G141642 |
| TU167453 | lncRNA | upstream | 3642 | 203141 ~ 203683 (+) | True | G141641 |
| TU167437 | lncRNA | upstream | 17080 | 189829 ~ 190245 (+) | True | G141625 |
| TU167413 | lncRNA | upstream | 68059 | 136541 ~ 139266 (+) | True | G141601 |
| TU167360 | lncRNA | upstream | 134749 | 64691 ~ 72576 (+) | True | G141558 |
| TU167497 | lncRNA | downstream | 34882 | 252596 ~ 253731 (+) | True | G141664 |
| TU167502 | lncRNA | downstream | 54312 | 272026 ~ 272294 (+) | True | G141669 |
| TU167505 | lncRNA | downstream | 60629 | 278343 ~ 278983 (+) | True | G141672 |
| TU167507 | lncRNA | downstream | 63882 | 281596 ~ 281856 (+) | True | G141674 |
| TU167511 | lncRNA | downstream | 64703 | 282417 ~ 297937 (+) | False | G141675 |
| XM_026911879.2 | mRNA | upstream | 73918 | 127708 ~ 133407 (+) | True | LOC113525382 |
| XM_034307532.1 | mRNA | upstream | 79987 | 115546 ~ 127338 (+) | True | fabp10b |
| XM_026911871.2 | mRNA | upstream | 92389 | 102820 ~ 114936 (+) | False | LOC113525374 |
| XM_026911870.2 | mRNA | upstream | 92390 | 102820 ~ 114935 (+) | True | LOC113525374 |
| XM_026911872.2 | mRNA | upstream | 118487 | 67609 ~ 88838 (+) | True | gpd1c |
| XM_026911543.2 | mRNA | downstream | 106432 | 324146 ~ 329984 (+) | True | LOC113525100 |
| XM_026911544.2 | mRNA | downstream | 220313 | 438027 ~ 444448 (+) | True | LOC113525101 |
| XM_026909968.2 | mRNA | downstream | 1244731 | 1462445 ~ 1473080 (+) | True | LOC113523903 |
| XM_026909931.2 | mRNA | downstream | 1278759 | 1496473 ~ 1505004 (+) | False | LOC113523877 |
| XM_026909932.2 | mRNA | downstream | 1278807 | 1496521 ~ 1505004 (+) | True | LOC113523877 |
| TU167368 | other | upstream | 111265 | 93086 ~ 96060 (+) | True | G141566 |
| TU167690 | other | downstream | 523135 | 740849 ~ 742201 (+) | False | G141823 |
| TU167699 | other | downstream | 549341 | 767055 ~ 812185 (+) | True | G141824 |
| LOC117598023 | other | downstream | 649955 | 867669 ~ 869091 (+) | True | LOC117598023 |
| TU167732 | other | downstream | 724307 | 942021 ~ 979635 (+) | True | LOC117598144 |
| TU167711 | other | downstream | 792955 | 1010669 ~ 1061264 (+) | False | G141825 |
