Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU167692 |
| length | 704 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 3 |
| gene id | G141823 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 674232 ~ 742201 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU167564 | lncRNA | upstream | 67042 | 478072 ~ 608632 (+) | True | G141722 |
| XR_004578875.1 | lncRNA | upstream | 67429 | 600873 ~ 608245 (+) | True | LOC117598182 |
| TU167581 | lncRNA | upstream | 69406 | 549350 ~ 606268 (+) | True | G141731 |
| TU167588 | lncRNA | upstream | 85310 | 588877 ~ 590364 (+) | True | G141738 |
| TU167552 | lncRNA | upstream | 173268 | 415274 ~ 502406 (+) | True | G141711 |
| TU167735 | lncRNA | downstream | 7494 | 749695 ~ 752390 (+) | True | LOC117598011 |
| XR_004578765.1 | lncRNA | downstream | 8367 | 750568 ~ 752101 (+) | False | LOC117598011 |
| XR_004578841.1 | lncRNA | downstream | 68499 | 810700 ~ 812196 (+) | True | LOC117598138 |
| TU167751 | lncRNA | downstream | 76400 | 818601 ~ 819087 (+) | True | G141846 |
| TU167752 | lncRNA | downstream | 89084 | 831285 ~ 846490 (+) | True | G141847 |
| XM_026911544.2 | mRNA | upstream | 231226 | 438027 ~ 444448 (+) | True | LOC113525101 |
| XM_026911543.2 | mRNA | upstream | 345690 | 324146 ~ 329984 (+) | True | LOC113525100 |
| XM_026911879.2 | mRNA | upstream | 542267 | 127708 ~ 133407 (+) | True | LOC113525382 |
| XM_034307532.1 | mRNA | upstream | 548336 | 115546 ~ 127338 (+) | True | fabp10b |
| XM_026911870.2 | mRNA | upstream | 560739 | 102820 ~ 114935 (+) | True | LOC113525374 |
| XM_026909968.2 | mRNA | downstream | 720244 | 1462445 ~ 1473080 (+) | True | LOC113523903 |
| XM_026909931.2 | mRNA | downstream | 754272 | 1496473 ~ 1505004 (+) | False | LOC113523877 |
| XM_026909932.2 | mRNA | downstream | 754320 | 1496521 ~ 1505004 (+) | True | LOC113523877 |
| XM_026909950.2 | mRNA | downstream | 792666 | 1534867 ~ 1540467 (+) | False | LOC113523893 |
| XM_034307151.1 | mRNA | downstream | 795958 | 1538159 ~ 1540467 (+) | True | LOC113523893 |
| TU167477 | other | upstream | 440153 | 212948 ~ 235521 (+) | True | G141647 |
| TU167368 | other | upstream | 579614 | 93086 ~ 96060 (+) | True | G141566 |
| TU167699 | other | downstream | 24854 | 767055 ~ 812185 (+) | True | G141824 |
| LOC117598023 | other | downstream | 125468 | 867669 ~ 869091 (+) | True | LOC117598023 |
| TU167732 | other | downstream | 199820 | 942021 ~ 979635 (+) | True | LOC117598144 |
| TU167711 | other | downstream | 268468 | 1010669 ~ 1061264 (+) | False | G141825 |
| LOC117598132 | other | downstream | 282923 | 1025124 ~ 1025991 (+) | True | LOC117598132 |
