Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578765.1 |
| length | 611 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | LOC117598011 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 749695 ~ 752390 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578764.1 | lncRNA | upstream | 8339 | 740829 ~ 742229 (+) | True | LOC117598010 |
| TU167692 | lncRNA | upstream | 8367 | 675674 ~ 742201 (+) | True | G141823 |
| TU167694 | lncRNA | upstream | 24843 | 674232 ~ 725725 (+) | False | G141823 |
| XR_004578841.1 | lncRNA | downstream | 58599 | 810700 ~ 812196 (+) | True | LOC117598138 |
| TU167751 | lncRNA | downstream | 66500 | 818601 ~ 819087 (+) | True | G141846 |
| TU167752 | lncRNA | downstream | 79184 | 831285 ~ 846490 (+) | True | G141847 |
| TU167729 | lncRNA | downstream | 79991 | 832092 ~ 850961 (+) | True | G141826 |
| XR_004578851.1 | lncRNA | downstream | 80125 | 832226 ~ 833728 (+) | True | LOC117598146 |
| XM_026911544.2 | mRNA | upstream | 306120 | 438027 ~ 444448 (+) | True | LOC113525101 |
| XM_026911543.2 | mRNA | upstream | 420584 | 324146 ~ 329984 (+) | True | LOC113525100 |
| XM_026911879.2 | mRNA | upstream | 617161 | 127708 ~ 133407 (+) | True | LOC113525382 |
| XM_034307532.1 | mRNA | upstream | 623230 | 115546 ~ 127338 (+) | True | fabp10b |
| XM_026911870.2 | mRNA | upstream | 635633 | 102820 ~ 114935 (+) | True | LOC113525374 |
| XM_026909968.2 | mRNA | downstream | 710344 | 1462445 ~ 1473080 (+) | True | LOC113523903 |
| XM_026909931.2 | mRNA | downstream | 744372 | 1496473 ~ 1505004 (+) | False | LOC113523877 |
| XM_026909932.2 | mRNA | downstream | 744420 | 1496521 ~ 1505004 (+) | True | LOC113523877 |
| XM_026909950.2 | mRNA | downstream | 782766 | 1534867 ~ 1540467 (+) | False | LOC113523893 |
| XM_034307151.1 | mRNA | downstream | 786058 | 1538159 ~ 1540467 (+) | True | LOC113523893 |
| TU167690 | other | upstream | 8367 | 740849 ~ 742201 (+) | False | G141823 |
| TU167477 | other | upstream | 515047 | 212948 ~ 235521 (+) | True | G141647 |
| TU167368 | other | upstream | 654508 | 93086 ~ 96060 (+) | True | G141566 |
| TU167699 | other | downstream | 14954 | 767055 ~ 812185 (+) | True | G141824 |
| LOC117598023 | other | downstream | 115568 | 867669 ~ 869091 (+) | True | LOC117598023 |
| TU167732 | other | downstream | 189920 | 942021 ~ 979635 (+) | True | LOC117598144 |
| TU167711 | other | downstream | 258568 | 1010669 ~ 1061264 (+) | False | G141825 |
| LOC117598132 | other | downstream | 273023 | 1025124 ~ 1025991 (+) | True | LOC117598132 |
