Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU168655 |
| length | 388 |
| lncRNA type | read_through |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G142437 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 2433614 ~ 2485388 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578831.1 | lncRNA | upstream | 3699 | 2419974 ~ 2429915 (+) | True | LOC117598110 |
| XR_004578832.1 | lncRNA | upstream | 3699 | 2419974 ~ 2429915 (+) | False | LOC117598110 |
| TU168637 | lncRNA | upstream | 37363 | 2391344 ~ 2396251 (+) | True | G142420 |
| TU168646 | lncRNA | upstream | 61259 | 2372124 ~ 2372355 (+) | True | G142429 |
| TU168606 | lncRNA | upstream | 74157 | 2358799 ~ 2359457 (+) | True | G142411 |
| XR_004578833.1 | lncRNA | downstream | 1798 | 2487186 ~ 2497488 (+) | False | LOC117598111 |
| TU168638 | lncRNA | downstream | 10608 | 2495996 ~ 2497632 (+) | True | LOC117598111 |
| TU168666 | lncRNA | downstream | 55862 | 2541250 ~ 2555657 (+) | True | G142443 |
| TU168621 | lncRNA | downstream | 58941 | 2544329 ~ 2559331 (+) | False | LOC113523823 |
| TU168665 | lncRNA | downstream | 64461 | 2549849 ~ 2555657 (+) | False | G142443 |
| XM_034307638.1 | mRNA | upstream | 26782 | 2398813 ~ 2406832 (+) | False | LOC117598105 |
| XM_034307639.1 | mRNA | upstream | 26782 | 2398813 ~ 2406832 (+) | False | LOC117598105 |
| XM_034307642.1 | mRNA | upstream | 49821 | 2374715 ~ 2383793 (+) | True | LOC117598106 |
| XM_034307643.1 | mRNA | upstream | 56703 | 2374699 ~ 2376911 (+) | False | LOC117598106 |
| XM_034307527.1 | mRNA | upstream | 75621 | 2353535 ~ 2357993 (+) | False | LOC117595676 |
| XM_034307645.1 | mRNA | downstream | 64917 | 2550305 ~ 2552377 (+) | True | LOC117598108 |
| XM_034307636.1 | mRNA | downstream | 68902 | 2554290 ~ 2558727 (+) | False | LOC117598105 |
| XM_034307464.1 | mRNA | downstream | 183739 | 2669127 ~ 2676154 (+) | True | LOC117598063 |
| XM_034307465.1 | mRNA | downstream | 183752 | 2669140 ~ 2676154 (+) | False | LOC117598063 |
| XM_034307450.1 | mRNA | downstream | 202407 | 2687795 ~ 2692842 (+) | True | LOC117598057 |
| TU168604 | other | upstream | 77382 | 2339449 ~ 2356232 (+) | False | LOC117595676 |
| XR_004578865.1 | other | upstream | 135908 | 2296293 ~ 2297706 (+) | True | LOC117598173 |
| XR_004578867.1 | other | upstream | 135908 | 2296633 ~ 2297706 (+) | False | LOC117598173 |
| XR_004578866.1 | other | upstream | 135908 | 2296959 ~ 2297706 (+) | False | LOC117598173 |
| XR_004578868.1 | other | upstream | 144975 | 2288098 ~ 2288639 (+) | False | LOC117598174 |
| TU168667 | other | downstream | 74423 | 2559811 ~ 2808637 (+) | True | LOC117598067 |
| LOC113523831 | other | downstream | 706552 | 3191940 ~ 3193368 (+) | True | LOC113523831 |
| LOC117598030 | other | downstream | 712488 | 3197876 ~ 3199324 (+) | True | LOC117598030 |
| trnac-gca_1 | other | downstream | 730589 | 3215977 ~ 3216048 (+) | True | trnac-gca_1 |
| trnac-gca_2 | other | downstream | 732030 | 3217418 ~ 3217489 (+) | True | trnac-gca_2 |
