Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU168671 |
| length | 611 |
| lncRNA type | read_through |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G142446 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 2579614 ~ 3008692 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU168670 | lncRNA | upstream | 8067 | 2564492 ~ 2571547 (+) | True | G142445 |
| TU168621 | lncRNA | upstream | 20283 | 2544329 ~ 2559331 (+) | False | LOC113523823 |
| TU168634 | lncRNA | upstream | 23448 | 2554057 ~ 2556166 (+) | False | LOC117598105 |
| TU168666 | lncRNA | upstream | 23957 | 2541250 ~ 2555657 (+) | True | G142443 |
| TU168665 | lncRNA | upstream | 23957 | 2549849 ~ 2555657 (+) | False | G142443 |
| TU168740 | lncRNA | downstream | 94727 | 3103419 ~ 3104643 (+) | True | G142502 |
| TU168741 | lncRNA | downstream | 95380 | 3104072 ~ 3104643 (+) | False | G142502 |
| TU168743 | lncRNA | downstream | 100825 | 3109517 ~ 3110320 (+) | True | G142504 |
| TU168772 | lncRNA | downstream | 150754 | 3159446 ~ 3193362 (+) | False | G142521 |
| TU168773 | lncRNA | downstream | 150754 | 3159446 ~ 3176981 (+) | False | G142521 |
| XM_034307641.1 | mRNA | upstream | 20887 | 2411742 ~ 2558727 (+) | False | LOC117598105 |
| XM_034307445.1 | mRNA | downstream | 5390 | 3014082 ~ 3032526 (+) | False | LOC113523823 |
| XM_034307446.1 | mRNA | downstream | 17612 | 3026304 ~ 3032526 (+) | False | LOC113523823 |
| XM_026909910.2 | mRNA | downstream | 46931 | 3055623 ~ 3061337 (+) | True | LOC113523850 |
| XM_026909916.2 | mRNA | downstream | 109596 | 3118288 ~ 3123714 (+) | True | rps18 |
| XM_034307287.1 | mRNA | downstream | 137346 | 3146038 ~ 3153846 (+) | True | slc39a7 |
| TU168662 | other | upstream | 101656 | 2475204 ~ 2477958 (+) | True | LOC117598104 |
| TU168604 | other | upstream | 223382 | 2339449 ~ 2356232 (+) | False | LOC117595676 |
| XR_004578865.1 | other | upstream | 281908 | 2296293 ~ 2297706 (+) | True | LOC117598173 |
| LOC113523831 | other | downstream | 183248 | 3191940 ~ 3193368 (+) | True | LOC113523831 |
| LOC117598030 | other | downstream | 189184 | 3197876 ~ 3199324 (+) | True | LOC117598030 |
| trnac-gca_1 | other | downstream | 207285 | 3215977 ~ 3216048 (+) | True | trnac-gca_1 |
| trnac-gca_2 | other | downstream | 208726 | 3217418 ~ 3217489 (+) | True | trnac-gca_2 |
| trnac-gca_3 | other | downstream | 210457 | 3219149 ~ 3219220 (+) | True | trnac-gca_3 |
