Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU169958 |
| length | 332 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G143510 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 5110709 ~ 5111040 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU169942 | lncRNA | upstream | 201186 | 4909320 ~ 4909523 (+) | True | G143494 |
| TU169895 | lncRNA | upstream | 396606 | 4713200 ~ 4714103 (+) | True | G143451 |
| TU169894 | lncRNA | upstream | 403557 | 4706907 ~ 4707152 (+) | True | G143450 |
| TU169892 | lncRNA | upstream | 406926 | 4703562 ~ 4703783 (+) | True | G143448 |
| TU169884 | lncRNA | upstream | 415848 | 4694384 ~ 4694861 (+) | True | G143440 |
| TU169966 | lncRNA | downstream | 81021 | 5192061 ~ 5193287 (+) | False | LOC117598093 |
| XR_004578816.1 | lncRNA | downstream | 81027 | 5192067 ~ 5194949 (+) | True | LOC117598093 |
| XR_004578817.1 | lncRNA | downstream | 81027 | 5192067 ~ 5194949 (+) | False | LOC117598093 |
| TU169986 | lncRNA | downstream | 247599 | 5358639 ~ 5375744 (+) | True | G143529 |
| TU169989 | lncRNA | downstream | 251221 | 5362261 ~ 5377117 (+) | True | G143532 |
| XM_034307199.1 | mRNA | upstream | 204846 | 4902900 ~ 4905863 (+) | True | LOC117597937 |
| XM_026947390.2 | mRNA | upstream | 420096 | 4671050 ~ 4690613 (+) | True | si:dkey-206d17.12 |
| XM_026947358.2 | mRNA | upstream | 479283 | 4606321 ~ 4631426 (+) | True | thrap3b |
| XM_026947321.2 | mRNA | upstream | 517121 | 4560320 ~ 4593588 (+) | False | map7d1b |
| XM_026947374.2 | mRNA | downstream | 303877 | 5414917 ~ 5420160 (+) | True | LOC113547138 |
| XM_034307132.1 | mRNA | downstream | 454281 | 5565321 ~ 5582749 (+) | False | LOC113547141 |
| XM_034307131.1 | mRNA | downstream | 454376 | 5565416 ~ 5582749 (+) | True | LOC113547141 |
| XM_026947312.2 | mRNA | downstream | 629867 | 5740907 ~ 5747940 (+) | True | gpx3 |
| XM_026947344.2 | mRNA | downstream | 727586 | 5838626 ~ 5850058 (+) | True | LOC113547120 |
| TU169682 | other | upstream | 605654 | 4484843 ~ 4505055 (+) | False | fhl3b |
| TU169683 | other | upstream | 605654 | 4484883 ~ 4505055 (+) | False | fhl3b |
| TU168849 | other | upstream | 1648538 | 3397670 ~ 3462171 (+) | False | G142576 |
| TU168853 | other | upstream | 1714642 | 3388253 ~ 3396067 (+) | True | LOC113523845 |
| XR_003402471.1 | other | upstream | 1742371 | 3368205 ~ 3368338 (+) | True | LOC113523858 |
| TU170101 | other | downstream | 629918 | 5740958 ~ 5747944 (+) | False | gpx3 |
| TU170815 | other | downstream | 1476171 | 6587211 ~ 6593605 (+) | True | LOC113547098 |
| TU170969 | other | downstream | 1668949 | 6779989 ~ 6798904 (+) | False | G144353 |
| LOC113547145 | other | downstream | 1672476 | 6783516 ~ 6785437 (+) | True | LOC113547145 |
| TU170957 | other | downstream | 1685769 | 6796809 ~ 6870576 (+) | True | G144353 |
