Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU170260 |
| length | 531 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G143766 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 5922811 ~ 5923752 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU170248 | lncRNA | upstream | 10070 | 5910983 ~ 5912741 (+) | True | G143757 |
| TU170250 | lncRNA | upstream | 10070 | 5911057 ~ 5912741 (+) | False | G143757 |
| TU170118 | lncRNA | upstream | 195224 | 5724880 ~ 5727587 (+) | True | G143644 |
| TU170093 | lncRNA | upstream | 269925 | 5649094 ~ 5652886 (+) | True | G143622 |
| XR_004578802.1 | lncRNA | upstream | 309503 | 5610562 ~ 5613308 (+) | True | LOC117598079 |
| TU170268 | lncRNA | downstream | 8829 | 5932581 ~ 5936329 (+) | True | G143772 |
| TU170347 | lncRNA | downstream | 54350 | 5978102 ~ 5984378 (+) | True | G143832 |
| TU170524 | lncRNA | downstream | 432565 | 6356317 ~ 6357920 (+) | True | G143987 |
| XR_003404779.2 | lncRNA | downstream | 498384 | 6422136 ~ 6428434 (+) | True | LOC113547099 |
| TU170785 | lncRNA | downstream | 620620 | 6544372 ~ 6544916 (+) | True | G144221 |
| XM_026947346.2 | mRNA | upstream | 19348 | 5865457 ~ 5903463 (+) | False | n4bp3 |
| XM_026947345.2 | mRNA | upstream | 19348 | 5881846 ~ 5903463 (+) | True | n4bp3 |
| XM_034307400.1 | mRNA | upstream | 61604 | 5854230 ~ 5861207 (+) | True | LOC113547110 |
| XM_026947344.2 | mRNA | upstream | 72753 | 5838626 ~ 5850058 (+) | True | LOC113547120 |
| XM_026947312.2 | mRNA | upstream | 174871 | 5740907 ~ 5747940 (+) | True | gpx3 |
| XM_026947347.2 | mRNA | downstream | 43990 | 5967742 ~ 5975213 (+) | True | ppp2caa |
| XM_034307233.1 | mRNA | downstream | 74715 | 5998467 ~ 6037800 (+) | True | LOC113547108 |
| XM_034307224.1 | mRNA | downstream | 74715 | 5998467 ~ 6018704 (+) | False | LOC113547108 |
| XM_034307226.1 | mRNA | downstream | 74715 | 5998467 ~ 6018704 (+) | False | LOC113547108 |
| XM_034307227.1 | mRNA | downstream | 74919 | 5998671 ~ 6018704 (+) | False | LOC113547108 |
| TU170101 | other | upstream | 174867 | 5740958 ~ 5747944 (+) | False | gpx3 |
| TU169682 | other | upstream | 1417756 | 4484843 ~ 4505055 (+) | False | fhl3b |
| TU169683 | other | upstream | 1417756 | 4484883 ~ 4505055 (+) | False | fhl3b |
| TU168849 | other | upstream | 2460640 | 3397670 ~ 3462171 (+) | False | G142576 |
| TU168853 | other | upstream | 2526744 | 3388253 ~ 3396067 (+) | True | LOC113523845 |
| TU170815 | other | downstream | 663459 | 6587211 ~ 6593605 (+) | True | LOC113547098 |
| TU170969 | other | downstream | 856237 | 6779989 ~ 6798904 (+) | False | G144353 |
| LOC113547145 | other | downstream | 859764 | 6783516 ~ 6785437 (+) | True | LOC113547145 |
| TU170957 | other | downstream | 873057 | 6796809 ~ 6870576 (+) | True | G144353 |
| LOC117598156 | other | downstream | 873220 | 6796972 ~ 6798904 (+) | True | LOC117598156 |
