Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU170785 |
| length | 545 |
| lncRNA type | inter_gene |
| GC content | 0.29 |
| exon number | 1 |
| gene id | G144221 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 6544372 ~ 6544916 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003404779.2 | lncRNA | upstream | 115938 | 6422136 ~ 6428434 (+) | True | LOC113547099 |
| TU170524 | lncRNA | upstream | 186452 | 6356317 ~ 6357920 (+) | True | G143987 |
| TU170347 | lncRNA | upstream | 559994 | 5978102 ~ 5984378 (+) | True | G143832 |
| TU170268 | lncRNA | upstream | 608043 | 5932581 ~ 5936329 (+) | True | G143772 |
| TU170260 | lncRNA | upstream | 620620 | 5922811 ~ 5923752 (+) | True | G143766 |
| TU170834 | lncRNA | downstream | 83435 | 6628351 ~ 6684107 (+) | True | G144256 |
| TU170960 | lncRNA | downstream | 238422 | 6783338 ~ 6830066 (+) | False | G144353 |
| TU170964 | lncRNA | downstream | 238422 | 6783338 ~ 6915019 (+) | False | G144353 |
| TU170970 | lncRNA | downstream | 238422 | 6783338 ~ 6877401 (+) | False | G144353 |
| TU170981 | lncRNA | downstream | 263055 | 6807971 ~ 6826908 (+) | True | G144359 |
| XM_026947395.2 | mRNA | upstream | 128986 | 6404746 ~ 6415386 (+) | True | proza |
| XM_026947309.2 | mRNA | upstream | 241807 | 6297766 ~ 6302565 (+) | True | ndufb9 |
| XM_034307383.1 | mRNA | upstream | 296667 | 6120616 ~ 6247705 (+) | True | syngap1a |
| XM_026947307.2 | mRNA | upstream | 426835 | 6108863 ~ 6117537 (+) | False | scn1bb |
| XM_026947313.2 | mRNA | downstream | 42451 | 6587367 ~ 6593560 (+) | False | LOC113547098 |
| XM_026947355.2 | mRNA | downstream | 60905 | 6605821 ~ 6679326 (+) | True | LOC113547127 |
| XM_034307439.1 | mRNA | downstream | 134568 | 6679484 ~ 6680169 (+) | True | LOC117598051 |
| XM_026947362.2 | mRNA | downstream | 147877 | 6692793 ~ 6733914 (+) | False | LOC113547131 |
| XM_026947363.2 | mRNA | downstream | 153396 | 6698312 ~ 6733914 (+) | True | LOC113547131 |
| TU170101 | other | upstream | 796428 | 5740958 ~ 5747944 (+) | False | gpx3 |
| TU169682 | other | upstream | 2039317 | 4484843 ~ 4505055 (+) | False | fhl3b |
| TU169683 | other | upstream | 2039317 | 4484883 ~ 4505055 (+) | False | fhl3b |
| TU168849 | other | upstream | 3082201 | 3397670 ~ 3462171 (+) | False | G142576 |
| TU168853 | other | upstream | 3148305 | 3388253 ~ 3396067 (+) | True | LOC113523845 |
| TU170815 | other | downstream | 42295 | 6587211 ~ 6593605 (+) | True | LOC113547098 |
| TU170969 | other | downstream | 235073 | 6779989 ~ 6798904 (+) | False | G144353 |
| LOC113547145 | other | downstream | 238600 | 6783516 ~ 6785437 (+) | True | LOC113547145 |
| TU170957 | other | downstream | 251893 | 6796809 ~ 6870576 (+) | True | G144353 |
| LOC117598156 | other | downstream | 252056 | 6796972 ~ 6798904 (+) | True | LOC117598156 |
