Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU170947 |
| length | 754 |
| RNA type | TUCP |
| GC content | 0.48 |
| exon number | 3 |
| gene id | G144353 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 6779989 ~ 6919661 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU170960 | lncRNA | upstream | 7738 | 6783338 ~ 6830066 (+) | False | G144353 |
| TU170983 | lncRNA | upstream | 9801 | 6824401 ~ 6828003 (+) | True | G144361 |
| TU170981 | lncRNA | upstream | 10896 | 6807971 ~ 6826908 (+) | True | G144359 |
| XR_004578857.1 | lncRNA | upstream | 21868 | 6813767 ~ 6815936 (+) | False | LOC117598166 |
| XR_004578858.1 | lncRNA | upstream | 22966 | 6813294 ~ 6814838 (+) | True | LOC117598166 |
| TU170973 | lncRNA | downstream | 11558 | 6868414 ~ 6908667 (+) | False | G144353 |
| XR_004578856.1 | lncRNA | downstream | 14276 | 6871132 ~ 6874093 (+) | True | LOC117598165 |
| TU170990 | lncRNA | downstream | 15963 | 6872819 ~ 6899792 (+) | False | LOC117598165 |
| XR_004578860.1 | lncRNA | downstream | 19370 | 6876226 ~ 6877268 (+) | True | LOC117598168 |
| TU171008 | lncRNA | downstream | 75724 | 6932580 ~ 6933301 (+) | True | G144382 |
| XM_026947362.2 | mRNA | upstream | 103890 | 6692793 ~ 6733914 (+) | False | LOC113547131 |
| XM_026947363.2 | mRNA | upstream | 103890 | 6698312 ~ 6733914 (+) | True | LOC113547131 |
| XM_034307439.1 | mRNA | upstream | 157635 | 6679484 ~ 6680169 (+) | True | LOC117598051 |
| XM_026947355.2 | mRNA | upstream | 158478 | 6605821 ~ 6679326 (+) | True | LOC113547127 |
| XM_026947313.2 | mRNA | upstream | 244244 | 6587367 ~ 6593560 (+) | False | LOC113547098 |
| XM_034307653.1 | mRNA | downstream | 396464 | 7253320 ~ 7264696 (+) | False | LOC113529730 |
| XM_034307652.1 | mRNA | downstream | 396465 | 7253321 ~ 7264696 (+) | True | LOC113529730 |
| XM_034307651.1 | mRNA | downstream | 396465 | 7253321 ~ 7264696 (+) | False | LOC113529730 |
| XM_026918781.2 | mRNA | downstream | 525222 | 7382078 ~ 7400425 (+) | True | LOC113529540 |
| XM_034307142.1 | mRNA | downstream | 532643 | 7389499 ~ 7400424 (+) | False | LOC113529540 |
| LOC113529732 | other | upstream | 3355 | 6830592 ~ 6834449 (+) | True | LOC113529732 |
| TU170969 | other | upstream | 38900 | 6779989 ~ 6798904 (+) | False | G144353 |
| LOC117598156 | other | upstream | 38900 | 6796972 ~ 6798904 (+) | True | LOC117598156 |
| LOC113547145 | other | upstream | 52367 | 6783516 ~ 6785437 (+) | True | LOC113547145 |
| TU170815 | other | upstream | 244199 | 6587211 ~ 6593605 (+) | True | LOC113547098 |
| TU170968 | other | downstream | 5851 | 6862707 ~ 6870576 (+) | False | G144353 |
| LOC117598164 | other | downstream | 12403 | 6869259 ~ 6870503 (+) | True | LOC117598164 |
| LOC113529731 | other | downstream | 23801 | 6880657 ~ 6882164 (+) | True | LOC113529731 |
| TU170951 | other | downstream | 37720 | 6894576 ~ 6908667 (+) | False | G144353 |
| TU170948 | other | downstream | 38249 | 6895105 ~ 6919661 (+) | False | G144353 |
