Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU170951 |
| length | 706 |
| RNA type | TUCP |
| GC content | 0.49 |
| exon number | 3 |
| gene id | G144353 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 6779989 ~ 6919661 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU170970 | lncRNA | upstream | 17175 | 6783338 ~ 6877401 (+) | False | G144353 |
| XR_004578860.1 | lncRNA | upstream | 17308 | 6876226 ~ 6877268 (+) | True | LOC117598168 |
| XR_004578856.1 | lncRNA | upstream | 20483 | 6871132 ~ 6874093 (+) | True | LOC117598165 |
| TU170960 | lncRNA | upstream | 64510 | 6783338 ~ 6830066 (+) | False | G144353 |
| TU170983 | lncRNA | upstream | 66573 | 6824401 ~ 6828003 (+) | True | G144361 |
| TU171008 | lncRNA | downstream | 23913 | 6932580 ~ 6933301 (+) | True | G144382 |
| TU171002 | lncRNA | downstream | 32034 | 6940701 ~ 6942295 (+) | True | G144376 |
| TU171012 | lncRNA | downstream | 42425 | 6951092 ~ 6951422 (+) | True | trnaw-cca_10 |
| TU171074 | lncRNA | downstream | 48970 | 6957637 ~ 6958164 (+) | True | G144442 |
| TU171076 | lncRNA | downstream | 49933 | 6958600 ~ 6961938 (+) | True | G144444 |
| XM_026947362.2 | mRNA | upstream | 160662 | 6692793 ~ 6733914 (+) | False | LOC113547131 |
| XM_026947363.2 | mRNA | upstream | 160662 | 6698312 ~ 6733914 (+) | True | LOC113547131 |
| XM_034307439.1 | mRNA | upstream | 214407 | 6679484 ~ 6680169 (+) | True | LOC117598051 |
| XM_026947355.2 | mRNA | upstream | 215250 | 6605821 ~ 6679326 (+) | True | LOC113547127 |
| XM_026947313.2 | mRNA | upstream | 301016 | 6587367 ~ 6593560 (+) | False | LOC113547098 |
| XM_034307653.1 | mRNA | downstream | 344653 | 7253320 ~ 7264696 (+) | False | LOC113529730 |
| XM_034307652.1 | mRNA | downstream | 344654 | 7253321 ~ 7264696 (+) | True | LOC113529730 |
| XM_034307651.1 | mRNA | downstream | 344654 | 7253321 ~ 7264696 (+) | False | LOC113529730 |
| XM_026918781.2 | mRNA | downstream | 473411 | 7382078 ~ 7400425 (+) | True | LOC113529540 |
| XM_034307142.1 | mRNA | downstream | 480832 | 7389499 ~ 7400424 (+) | False | LOC113529540 |
| LOC113529731 | other | upstream | 12412 | 6880657 ~ 6882164 (+) | True | LOC113529731 |
| TU170968 | other | upstream | 24000 | 6862707 ~ 6870576 (+) | False | G144353 |
| LOC117598164 | other | upstream | 24073 | 6869259 ~ 6870503 (+) | True | LOC117598164 |
| TU170947 | other | upstream | 37720 | 6837804 ~ 6856856 (+) | False | G144353 |
| trnaw-cca_10 | other | downstream | 42405 | 6951072 ~ 6951143 (+) | False | trnaw-cca_10 |
| trnaw-cca_11 | other | downstream | 44135 | 6952802 ~ 6952873 (+) | True | trnaw-cca_11 |
| trnaw-cca_12 | other | downstream | 47778 | 6956445 ~ 6956516 (+) | True | trnaw-cca_12 |
| trnag-ccc_3 | other | downstream | 316811 | 7225478 ~ 7225548 (+) | True | trnag-ccc_3 |
| trnaa-agc_3 | other | downstream | 700374 | 7609041 ~ 7609113 (+) | True | trnaa-agc_3 |
