Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU170981 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 2 |
| gene id | G144359 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 6807971 ~ 6826908 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU170834 | lncRNA | upstream | 123864 | 6628351 ~ 6684107 (+) | True | G144256 |
| TU170785 | lncRNA | upstream | 263055 | 6544372 ~ 6544916 (+) | True | G144221 |
| XR_003404779.2 | lncRNA | upstream | 379537 | 6422136 ~ 6428434 (+) | True | LOC113547099 |
| TU170524 | lncRNA | upstream | 450051 | 6356317 ~ 6357920 (+) | True | G143987 |
| TU170347 | lncRNA | upstream | 823593 | 5978102 ~ 5984378 (+) | True | G143832 |
| TU170973 | lncRNA | downstream | 41506 | 6868414 ~ 6908667 (+) | False | G144353 |
| XR_004578856.1 | lncRNA | downstream | 44224 | 6871132 ~ 6874093 (+) | True | LOC117598165 |
| TU170990 | lncRNA | downstream | 45911 | 6872819 ~ 6899792 (+) | False | LOC117598165 |
| XR_004578860.1 | lncRNA | downstream | 49318 | 6876226 ~ 6877268 (+) | True | LOC117598168 |
| TU171008 | lncRNA | downstream | 105672 | 6932580 ~ 6933301 (+) | True | G144382 |
| XM_026947362.2 | mRNA | upstream | 74057 | 6692793 ~ 6733914 (+) | False | LOC113547131 |
| XM_026947363.2 | mRNA | upstream | 74057 | 6698312 ~ 6733914 (+) | True | LOC113547131 |
| XM_034307439.1 | mRNA | upstream | 127802 | 6679484 ~ 6680169 (+) | True | LOC117598051 |
| XM_026947355.2 | mRNA | upstream | 128645 | 6605821 ~ 6679326 (+) | True | LOC113547127 |
| XM_026947313.2 | mRNA | upstream | 214411 | 6587367 ~ 6593560 (+) | False | LOC113547098 |
| XM_034307653.1 | mRNA | downstream | 426412 | 7253320 ~ 7264696 (+) | False | LOC113529730 |
| XM_034307652.1 | mRNA | downstream | 426413 | 7253321 ~ 7264696 (+) | True | LOC113529730 |
| XM_034307651.1 | mRNA | downstream | 426413 | 7253321 ~ 7264696 (+) | False | LOC113529730 |
| XM_026918781.2 | mRNA | downstream | 555170 | 7382078 ~ 7400425 (+) | True | LOC113529540 |
| XM_034307142.1 | mRNA | downstream | 562591 | 7389499 ~ 7400424 (+) | False | LOC113529540 |
| TU170969 | other | upstream | 9067 | 6779989 ~ 6798904 (+) | False | G144353 |
| LOC117598156 | other | upstream | 9067 | 6796972 ~ 6798904 (+) | True | LOC117598156 |
| LOC113547145 | other | upstream | 22534 | 6783516 ~ 6785437 (+) | True | LOC113547145 |
| TU170815 | other | upstream | 214366 | 6587211 ~ 6593605 (+) | True | LOC113547098 |
| TU170101 | other | upstream | 1060027 | 5740958 ~ 5747944 (+) | False | gpx3 |
| LOC113529732 | other | downstream | 3684 | 6830592 ~ 6834449 (+) | True | LOC113529732 |
| LOC117598033 | other | downstream | 10147 | 6837055 ~ 6839420 (+) | True | LOC117598033 |
| TU170974 | other | downstream | 10316 | 6837224 ~ 6843968 (+) | False | G144353 |
| TU170947 | other | downstream | 10896 | 6837804 ~ 6856856 (+) | False | G144353 |
| LOC117598034 | other | downstream | 15029 | 6841937 ~ 6843964 (+) | True | LOC117598034 |
