Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU171231 |
| length | 211 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 2 |
| gene id | gabra6a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 7447870 ~ 7466552 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU171170 | lncRNA | upstream | 27050 | 7418761 ~ 7420820 (+) | True | G144523 |
| TU171130 | lncRNA | upstream | 180955 | 7239003 ~ 7266915 (+) | True | G144486 |
| XR_003403117.2 | lncRNA | upstream | 308498 | 7132850 ~ 7139372 (+) | True | LOC113530161 |
| TU171111 | lncRNA | upstream | 310955 | 7132850 ~ 7136915 (+) | False | LOC113530161 |
| XR_004578812.1 | lncRNA | upstream | 311155 | 7132850 ~ 7136715 (+) | False | LOC113530161 |
| TU171240 | lncRNA | downstream | 126577 | 7575108 ~ 7575491 (+) | True | G144568 |
| TU171367 | lncRNA | downstream | 127529 | 7576060 ~ 7576788 (+) | True | G144661 |
| TU171371 | lncRNA | downstream | 129597 | 7578128 ~ 7578377 (+) | True | G144665 |
| TU171439 | lncRNA | downstream | 237217 | 7685748 ~ 7688153 (+) | True | G144715 |
| TU171450 | lncRNA | downstream | 255550 | 7704081 ~ 7704763 (+) | True | G144726 |
| XM_026920013.2 | mRNA | upstream | 3604 | 7439695 ~ 7444266 (+) | True | ccng1 |
| XM_026918713.2 | mRNA | upstream | 13640 | 7422869 ~ 7434230 (+) | True | LOC113529491 |
| XM_026918647.2 | mRNA | upstream | 29342 | 7401497 ~ 7418528 (+) | True | sfxn1 |
| XM_026918781.2 | mRNA | upstream | 47445 | 7382078 ~ 7400425 (+) | True | LOC113529540 |
| XM_034307142.1 | mRNA | upstream | 47446 | 7389499 ~ 7400424 (+) | False | LOC113529540 |
| XM_026919243.2 | mRNA | downstream | 19241 | 7467772 ~ 7525350 (+) | True | gabrb2a |
| XM_026919245.2 | mRNA | downstream | 19241 | 7467772 ~ 7523914 (+) | False | gabrb2a |
| XM_034307125.1 | mRNA | downstream | 87804 | 7536335 ~ 7574229 (+) | False | atp10b |
| XM_026918736.2 | mRNA | downstream | 88943 | 7537474 ~ 7574229 (+) | True | atp10b |
| XM_026919168.2 | mRNA | downstream | 197797 | 7646328 ~ 7672282 (+) | False | atp7a |
| trnag-ccc_3 | other | upstream | 222322 | 7225478 ~ 7225548 (+) | True | trnag-ccc_3 |
| trnaw-cca_12 | other | upstream | 491354 | 6956445 ~ 6956516 (+) | True | trnaw-cca_12 |
| trnaw-cca_11 | other | upstream | 494997 | 6952802 ~ 6952873 (+) | True | trnaw-cca_11 |
| trnaw-cca_10 | other | upstream | 496727 | 6951072 ~ 6951143 (+) | False | trnaw-cca_10 |
| LOC117598150 | other | upstream | 539294 | 6907189 ~ 6908576 (+) | True | LOC117598150 |
| trnaa-agc_3 | other | downstream | 160510 | 7609041 ~ 7609113 (+) | True | trnaa-agc_3 |
| trnaa-agc_4 | other | downstream | 163239 | 7611770 ~ 7611842 (+) | True | trnaa-agc_4 |
| trnaa-agc_5 | other | downstream | 165974 | 7614505 ~ 7614577 (+) | True | trnaa-agc_5 |
| trnaa-agc_6 | other | downstream | 171406 | 7619937 ~ 7620009 (+) | True | trnaa-agc_6 |
| trnaa-agc_7 | other | downstream | 185967 | 7634498 ~ 7634570 (+) | True | trnaa-agc_7 |
