Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU173306 |
| length | 965 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G146308 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 11016095 ~ 11017354 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU173320 | lncRNA | upstream | 119711 | 10895741 ~ 10896384 (+) | True | G146322 |
| XR_003403072.2 | lncRNA | upstream | 257288 | 10755909 ~ 10758807 (+) | True | LOC113529600 |
| TU173176 | lncRNA | upstream | 420558 | 10554366 ~ 10595537 (+) | False | LOC113529865 |
| TU173117 | lncRNA | upstream | 489237 | 10526543 ~ 10526858 (+) | True | G146168 |
| TU173088 | lncRNA | upstream | 565072 | 10450676 ~ 10451023 (+) | True | G146141 |
| TU173380 | lncRNA | downstream | 33862 | 11051216 ~ 11051420 (+) | True | G146377 |
| TU173383 | lncRNA | downstream | 35813 | 11053167 ~ 11053425 (+) | True | G146380 |
| TU173544 | lncRNA | downstream | 204227 | 11221581 ~ 11293483 (+) | True | G146513 |
| TU173609 | lncRNA | downstream | 399824 | 11417178 ~ 11417389 (+) | True | G146576 |
| TU173606 | lncRNA | downstream | 424176 | 11441530 ~ 11443247 (+) | True | G146573 |
| XM_034307081.1 | mRNA | upstream | 181571 | 10832104 ~ 10834524 (+) | True | LOC117597888 |
| XM_034307080.1 | mRNA | upstream | 188709 | 10825470 ~ 10827386 (+) | True | LOC117597887 |
| XM_034307120.1 | mRNA | upstream | 202973 | 10811938 ~ 10813122 (+) | True | LOC117597912 |
| XM_034307079.1 | mRNA | upstream | 204900 | 10804439 ~ 10811195 (+) | True | LOC117597886 |
| XM_034307121.1 | mRNA | upstream | 211656 | 10803659 ~ 10804439 (+) | True | LOC117597913 |
| XM_026918809.2 | mRNA | downstream | 181512 | 11198866 ~ 11227888 (+) | True | LOC113529553 |
| XM_026918810.2 | mRNA | downstream | 181512 | 11198866 ~ 11227888 (+) | False | LOC113529553 |
| XM_026919619.2 | mRNA | downstream | 277774 | 11295128 ~ 11306318 (+) | True | hrh2a |
| XM_026919618.2 | mRNA | downstream | 277774 | 11295128 ~ 11304023 (+) | False | hrh2a |
| XM_026918811.2 | mRNA | downstream | 307003 | 11324357 ~ 11335757 (+) | True | LOC113529554 |
| TU173183 | other | upstream | 468303 | 10543875 ~ 10547792 (+) | False | si:ch73-233f7.1 |
| TU172076 | other | upstream | 2173829 | 8841476 ~ 8842266 (+) | True | G145233 |
| trnaa-agc_11 | other | upstream | 2971685 | 8044338 ~ 8044410 (+) | True | trnaa-agc_11 |
| trnaa-agc_10 | other | upstream | 2973788 | 8042235 ~ 8042307 (+) | True | trnaa-agc_10 |
| trnaa-agc_8 | other | upstream | 2976424 | 8039599 ~ 8039671 (+) | True | trnaa-agc_8 |
| XR_004578672.1 | other | downstream | 277774 | 11295128 ~ 11306318 (+) | False | hrh2a |
| XR_003403100.2 | other | downstream | 277774 | 11295128 ~ 11303946 (+) | False | hrh2a |
| TU174750 | other | downstream | 1899565 | 12916919 ~ 12917254 (+) | True | G147542 |
| TU175114 | other | downstream | 2331972 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| XR_003403080.2 | other | downstream | 2743980 | 13761334 ~ 13775183 (+) | False | ces2b |
