Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU173827 |
| length | 656 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G146741 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 11728026 ~ 11728681 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU173749 | lncRNA | upstream | 53535 | 11673327 ~ 11674491 (+) | False | G146687 |
| TU173755 | lncRNA | upstream | 53653 | 11672994 ~ 11674373 (+) | False | G146687 |
| TU173756 | lncRNA | upstream | 53653 | 11673327 ~ 11674373 (+) | False | G146687 |
| TU173751 | lncRNA | upstream | 55109 | 11671836 ~ 11672917 (+) | False | G146687 |
| TU173754 | lncRNA | upstream | 55420 | 11671836 ~ 11672606 (+) | False | G146687 |
| TU173854 | lncRNA | downstream | 72396 | 11801077 ~ 11830797 (+) | True | G146765 |
| TU173883 | lncRNA | downstream | 197187 | 11925868 ~ 11929820 (+) | True | G146791 |
| TU173998 | lncRNA | downstream | 331614 | 12060295 ~ 12060586 (+) | True | G146877 |
| TU174004 | lncRNA | downstream | 363499 | 12092180 ~ 12100566 (+) | False | G146883 |
| TU174005 | lncRNA | downstream | 363499 | 12092180 ~ 12096161 (+) | True | G146883 |
| XM_026918780.2 | mRNA | upstream | 58427 | 11631622 ~ 11669599 (+) | False | LOC113529539 |
| XM_034307602.1 | mRNA | upstream | 58427 | 11633261 ~ 11669599 (+) | True | LOC113529539 |
| XM_034307314.1 | mRNA | upstream | 111382 | 11602447 ~ 11616644 (+) | True | LOC113529641 |
| XM_026918972.2 | mRNA | upstream | 130056 | 11595499 ~ 11597970 (+) | True | atp6v0e1 |
| XM_026918970.2 | mRNA | upstream | 134238 | 11589041 ~ 11593788 (+) | False | rpl26 |
| XM_026918598.2 | mRNA | downstream | 144215 | 11872896 ~ 11880458 (+) | True | smu1a |
| XM_026918748.2 | mRNA | downstream | 175012 | 11903693 ~ 11924459 (+) | True | tbc1d2 |
| XM_026919978.2 | mRNA | downstream | 235456 | 11964137 ~ 11997179 (+) | True | abca1b |
| XM_026919570.2 | mRNA | downstream | 277589 | 12006270 ~ 12011510 (+) | True | thg1l |
| XM_026918699.2 | mRNA | downstream | 335736 | 12064417 ~ 12070764 (+) | True | irf7 |
| XR_004578672.1 | other | upstream | 421708 | 11295128 ~ 11306318 (+) | False | hrh2a |
| XR_003403100.2 | other | upstream | 424080 | 11295128 ~ 11303946 (+) | False | hrh2a |
| TU173183 | other | upstream | 1180234 | 10543875 ~ 10547792 (+) | False | si:ch73-233f7.1 |
| TU172076 | other | upstream | 2885760 | 8841476 ~ 8842266 (+) | True | G145233 |
| trnaa-agc_11 | other | upstream | 3683616 | 8044338 ~ 8044410 (+) | True | trnaa-agc_11 |
| TU174750 | other | downstream | 1188238 | 12916919 ~ 12917254 (+) | True | G147542 |
| TU175114 | other | downstream | 1620645 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| XR_003403080.2 | other | downstream | 2032653 | 13761334 ~ 13775183 (+) | False | ces2b |
| trnar-ucg_5 | other | downstream | 2091909 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_004578669.1 | other | downstream | 4079309 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
