Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU174803 |
| length | 203 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G147582 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 12969147 ~ 13073808 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU174767 | lncRNA | upstream | 26086 | 12939406 ~ 12943061 (+) | True | G147558 |
| TU174762 | lncRNA | upstream | 31443 | 12932881 ~ 12937704 (+) | True | G147554 |
| TU174677 | lncRNA | upstream | 137081 | 12831828 ~ 12832066 (+) | True | G147479 |
| TU174670 | lncRNA | upstream | 157818 | 12810522 ~ 12811329 (+) | True | G147472 |
| TU174636 | lncRNA | upstream | 277725 | 12690927 ~ 12691422 (+) | True | G147438 |
| TU174857 | lncRNA | downstream | 90768 | 13164576 ~ 13164790 (+) | True | G147630 |
| TU174869 | lncRNA | downstream | 113883 | 13187691 ~ 13188284 (+) | True | G147641 |
| XR_004578665.1 | lncRNA | downstream | 255834 | 13329642 ~ 13333044 (+) | True | LOC117597924 |
| TU175059 | lncRNA | downstream | 286227 | 13360035 ~ 13371776 (+) | True | G147784 |
| TU175060 | lncRNA | downstream | 286227 | 13360035 ~ 13371776 (+) | False | G147784 |
| XM_026919520.2 | mRNA | upstream | 105592 | 12862501 ~ 12863555 (+) | True | phlda2 |
| XM_026919392.2 | mRNA | upstream | 118754 | 12837011 ~ 12850393 (+) | False | nap1l4a |
| XM_026919393.2 | mRNA | upstream | 118754 | 12837012 ~ 12850393 (+) | True | nap1l4a |
| XM_026919663.2 | mRNA | upstream | 162694 | 12781288 ~ 12806453 (+) | True | si:ch211-236l14.4 |
| XM_026919748.2 | mRNA | upstream | 284326 | 12681130 ~ 12684821 (+) | True | igf2b |
| XM_026919270.2 | mRNA | downstream | 49335 | 13123143 ~ 13161929 (+) | False | dusp8a |
| XM_026919271.2 | mRNA | downstream | 52678 | 13126486 ~ 13161929 (+) | False | dusp8a |
| XM_026919272.2 | mRNA | downstream | 77938 | 13151746 ~ 13161929 (+) | True | dusp8a |
| XM_026919079.2 | mRNA | downstream | 96887 | 13170695 ~ 13215991 (+) | True | mob2a |
| XM_026919076.2 | mRNA | downstream | 115876 | 13189684 ~ 13215991 (+) | False | mob2a |
| TU174750 | other | upstream | 51893 | 12916919 ~ 12917254 (+) | True | G147542 |
| XR_004578672.1 | other | upstream | 1662829 | 11295128 ~ 11306318 (+) | False | hrh2a |
| XR_003403100.2 | other | upstream | 1665201 | 11295128 ~ 11303946 (+) | False | hrh2a |
| TU173183 | other | upstream | 2421355 | 10543875 ~ 10547792 (+) | False | si:ch73-233f7.1 |
| TU172076 | other | upstream | 4126881 | 8841476 ~ 8842266 (+) | True | G145233 |
| TU175114 | other | downstream | 275518 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| XR_003403080.2 | other | downstream | 687526 | 13761334 ~ 13775183 (+) | False | ces2b |
| trnar-ucg_5 | other | downstream | 746782 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_004578669.1 | other | downstream | 2734182 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
| XR_004578670.1 | other | downstream | 2734182 | 15807990 ~ 15820156 (+) | False | LOC113529564 |
