Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU174869 |
| length | 594 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G147641 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 13187691 ~ 13188284 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU174857 | lncRNA | upstream | 22901 | 13164576 ~ 13164790 (+) | True | G147630 |
| TU174766 | lncRNA | upstream | 89277 | 12994188 ~ 13098414 (+) | True | G147557 |
| TU174826 | lncRNA | upstream | 97186 | 13070255 ~ 13090505 (+) | True | G147602 |
| TU174803 | lncRNA | upstream | 113883 | 12969147 ~ 13073808 (+) | True | G147582 |
| TU174771 | lncRNA | upstream | 170834 | 13014961 ~ 13016857 (+) | True | G147559 |
| XR_004578665.1 | lncRNA | downstream | 141358 | 13329642 ~ 13333044 (+) | True | LOC117597924 |
| TU175059 | lncRNA | downstream | 171751 | 13360035 ~ 13371776 (+) | True | G147784 |
| TU175060 | lncRNA | downstream | 171751 | 13360035 ~ 13371776 (+) | False | G147784 |
| TU175061 | lncRNA | downstream | 171751 | 13360035 ~ 13371776 (+) | False | G147784 |
| TU175083 | lncRNA | downstream | 184588 | 13372872 ~ 13389196 (+) | False | prr33 |
| XM_026919270.2 | mRNA | upstream | 25762 | 13123143 ~ 13161929 (+) | False | dusp8a |
| XM_026919271.2 | mRNA | upstream | 25762 | 13126486 ~ 13161929 (+) | False | dusp8a |
| XM_026919272.2 | mRNA | upstream | 25762 | 13151746 ~ 13161929 (+) | True | dusp8a |
| XM_026919520.2 | mRNA | upstream | 324136 | 12862501 ~ 12863555 (+) | True | phlda2 |
| XM_026919393.2 | mRNA | upstream | 337298 | 12837012 ~ 12850393 (+) | True | nap1l4a |
| XM_026919076.2 | mRNA | downstream | 1400 | 13189684 ~ 13215991 (+) | False | mob2a |
| XM_026919078.2 | mRNA | downstream | 4341 | 13192625 ~ 13215991 (+) | False | mob2a |
| XM_026919077.2 | mRNA | downstream | 16993 | 13205277 ~ 13215991 (+) | False | mob2a |
| XM_026918818.2 | mRNA | downstream | 161039 | 13349323 ~ 13353262 (+) | True | zgc:172145 |
| XM_026919512.2 | mRNA | downstream | 167949 | 13356233 ~ 13358154 (+) | True | myod1 |
| TU174750 | other | upstream | 270437 | 12916919 ~ 12917254 (+) | True | G147542 |
| XR_004578672.1 | other | upstream | 1881373 | 11295128 ~ 11306318 (+) | False | hrh2a |
| XR_003403100.2 | other | upstream | 1883745 | 11295128 ~ 11303946 (+) | False | hrh2a |
| TU173183 | other | upstream | 2639899 | 10543875 ~ 10547792 (+) | False | si:ch73-233f7.1 |
| TU172076 | other | upstream | 4345425 | 8841476 ~ 8842266 (+) | True | G145233 |
| TU175114 | other | downstream | 161042 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| XR_003403080.2 | other | downstream | 573050 | 13761334 ~ 13775183 (+) | False | ces2b |
| trnar-ucg_5 | other | downstream | 632306 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_004578669.1 | other | downstream | 2619706 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
| XR_004578670.1 | other | downstream | 2619706 | 15807990 ~ 15820156 (+) | False | LOC113529564 |
