Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU175091 |
| length | 392 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G147787 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 13390317 ~ 13390708 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU175083 | lncRNA | upstream | 1121 | 13372872 ~ 13389196 (+) | False | prr33 |
| TU175059 | lncRNA | upstream | 18541 | 13360035 ~ 13371776 (+) | True | G147784 |
| TU175060 | lncRNA | upstream | 18541 | 13360035 ~ 13371776 (+) | False | G147784 |
| TU175061 | lncRNA | upstream | 18541 | 13360035 ~ 13371776 (+) | False | G147784 |
| XR_004578665.1 | lncRNA | upstream | 57273 | 13329642 ~ 13333044 (+) | True | LOC117597924 |
| TU175096 | lncRNA | downstream | 1390 | 13392098 ~ 13392749 (+) | True | G147792 |
| TU175126 | lncRNA | downstream | 8116 | 13398824 ~ 13399521 (+) | False | G147814 |
| TU175127 | lncRNA | downstream | 8116 | 13398824 ~ 13399650 (+) | True | G147814 |
| TU175122 | lncRNA | downstream | 8602 | 13399310 ~ 13399521 (+) | False | G147814 |
| TU175123 | lncRNA | downstream | 8602 | 13399310 ~ 13399650 (+) | False | G147814 |
| XM_026919136.2 | mRNA | upstream | 9065 | 13372902 ~ 13381252 (+) | True | prr33 |
| XM_026919512.2 | mRNA | upstream | 32163 | 13356233 ~ 13358154 (+) | True | myod1 |
| XM_026918818.2 | mRNA | upstream | 37055 | 13349323 ~ 13353262 (+) | True | zgc:172145 |
| XM_026919076.2 | mRNA | upstream | 174326 | 13189684 ~ 13215991 (+) | False | mob2a |
| XM_026919734.2 | mRNA | downstream | 74565 | 13465273 ~ 13470743 (+) | True | pdcd2l |
| XM_026919735.2 | mRNA | downstream | 74565 | 13465273 ~ 13470743 (+) | False | pdcd2l |
| XM_034307428.1 | mRNA | downstream | 82476 | 13473184 ~ 13522795 (+) | False | banp |
| XM_026919960.2 | mRNA | downstream | 82492 | 13473200 ~ 13522795 (+) | True | banp |
| XM_026919961.2 | mRNA | downstream | 82493 | 13473201 ~ 13522795 (+) | False | banp |
| TU175114 | other | upstream | 37064 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| TU174750 | other | upstream | 473063 | 12916919 ~ 12917254 (+) | True | G147542 |
| XR_004578672.1 | other | upstream | 2083999 | 11295128 ~ 11306318 (+) | False | hrh2a |
| XR_003403100.2 | other | upstream | 2086371 | 11295128 ~ 11303946 (+) | False | hrh2a |
| TU173183 | other | upstream | 2842525 | 10543875 ~ 10547792 (+) | False | si:ch73-233f7.1 |
| XR_003403080.2 | other | downstream | 370626 | 13761334 ~ 13775183 (+) | False | ces2b |
| trnar-ucg_5 | other | downstream | 429882 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_004578669.1 | other | downstream | 2417282 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
| XR_004578670.1 | other | downstream | 2417282 | 15807990 ~ 15820156 (+) | False | LOC113529564 |
| XR_003403067.2 | other | downstream | 2417282 | 15807990 ~ 15819573 (+) | False | LOC113529564 |
