Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU176101 |
| length | 670 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G148654 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 14887534 ~ 14888203 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176086 | lncRNA | upstream | 83080 | 14804141 ~ 14804454 (+) | True | G148645 |
| TU175974 | lncRNA | upstream | 149184 | 14723351 ~ 14738350 (+) | True | G148551 |
| TU175944 | lncRNA | upstream | 384652 | 14502622 ~ 14502882 (+) | True | G148521 |
| TU175875 | lncRNA | upstream | 587298 | 14300017 ~ 14300236 (+) | True | G148459 |
| TU175721 | lncRNA | upstream | 802113 | 14085219 ~ 14085421 (+) | True | G148327 |
| TU176237 | lncRNA | downstream | 154930 | 15043133 ~ 15043881 (+) | True | G148787 |
| TU176315 | lncRNA | downstream | 214275 | 15102478 ~ 15102695 (+) | True | G148862 |
| TU176320 | lncRNA | downstream | 248287 | 15136490 ~ 15137999 (+) | True | G148866 |
| XR_003403125.1 | lncRNA | downstream | 248298 | 15136501 ~ 15136728 (+) | True | LOC113530229 |
| XR_003403126.2 | lncRNA | downstream | 249539 | 15137742 ~ 15137952 (+) | True | LOC113530230 |
| XM_026919909.2 | mRNA | upstream | 567 | 14838032 ~ 14886967 (+) | False | trim44 |
| XM_026919908.2 | mRNA | upstream | 567 | 14838040 ~ 14886967 (+) | True | trim44 |
| XM_026918802.2 | mRNA | upstream | 74828 | 14809908 ~ 14812706 (+) | True | fjx1 |
| XM_026919383.2 | mRNA | upstream | 178100 | 14693632 ~ 14709434 (+) | True | cd44b |
| XM_026919352.2 | mRNA | upstream | 205217 | 14639460 ~ 14682317 (+) | True | pdhx |
| XM_026919008.2 | mRNA | downstream | 23024 | 14911227 ~ 14994873 (+) | False | ldlrad3 |
| XM_026919007.2 | mRNA | downstream | 23025 | 14911228 ~ 14994873 (+) | True | ldlrad3 |
| XM_026919685.2 | mRNA | downstream | 201072 | 15089275 ~ 15096339 (+) | True | LOC113530018 |
| XM_026919686.2 | mRNA | downstream | 201072 | 15089275 ~ 15096339 (+) | False | LOC113530018 |
| XM_026919824.2 | mRNA | downstream | 214721 | 15102924 ~ 15111187 (+) | False | metap2b |
| trnar-ucg_5 | other | upstream | 1066872 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_003403080.2 | other | upstream | 1112351 | 13761334 ~ 13775183 (+) | False | ces2b |
| TU175114 | other | upstream | 1534281 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| TU174750 | other | upstream | 1970280 | 12916919 ~ 12917254 (+) | True | G147542 |
| XR_003403100.2 | other | upstream | 3583588 | 11295128 ~ 11303946 (+) | False | hrh2a |
| XR_004578669.1 | other | downstream | 919787 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
| XR_004578670.1 | other | downstream | 919787 | 15807990 ~ 15820156 (+) | False | LOC113529564 |
| XR_003403067.2 | other | downstream | 919787 | 15807990 ~ 15819573 (+) | False | LOC113529564 |
| trnav-aac_18 | other | downstream | 1152972 | 16041175 ~ 16041247 (+) | True | trnav-aac_18 |
| TU178368 | other | downstream | 2946034 | 17834237 ~ 17842535 (+) | True | G150589 |
