Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU176237 |
| length | 749 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G148787 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 15043133 ~ 15043881 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176101 | lncRNA | upstream | 154930 | 14887534 ~ 14888203 (+) | True | G148654 |
| TU176086 | lncRNA | upstream | 238679 | 14804141 ~ 14804454 (+) | True | G148645 |
| TU175974 | lncRNA | upstream | 304783 | 14723351 ~ 14738350 (+) | True | G148551 |
| TU175944 | lncRNA | upstream | 540251 | 14502622 ~ 14502882 (+) | True | G148521 |
| TU175875 | lncRNA | upstream | 742897 | 14300017 ~ 14300236 (+) | True | G148459 |
| TU176315 | lncRNA | downstream | 58597 | 15102478 ~ 15102695 (+) | True | G148862 |
| TU176320 | lncRNA | downstream | 92609 | 15136490 ~ 15137999 (+) | True | G148866 |
| XR_003403125.1 | lncRNA | downstream | 92620 | 15136501 ~ 15136728 (+) | True | LOC113530229 |
| XR_003403126.2 | lncRNA | downstream | 93861 | 15137742 ~ 15137952 (+) | True | LOC113530230 |
| TU176323 | lncRNA | downstream | 104805 | 15148686 ~ 15149272 (+) | True | G148869 |
| XM_026919008.2 | mRNA | upstream | 48260 | 14911227 ~ 14994873 (+) | False | ldlrad3 |
| XM_026919007.2 | mRNA | upstream | 48260 | 14911228 ~ 14994873 (+) | True | ldlrad3 |
| XM_026919909.2 | mRNA | upstream | 156166 | 14838032 ~ 14886967 (+) | False | trim44 |
| XM_026919908.2 | mRNA | upstream | 156166 | 14838040 ~ 14886967 (+) | True | trim44 |
| XM_026918802.2 | mRNA | upstream | 230427 | 14809908 ~ 14812706 (+) | True | fjx1 |
| XM_026919685.2 | mRNA | downstream | 45394 | 15089275 ~ 15096339 (+) | True | LOC113530018 |
| XM_026919686.2 | mRNA | downstream | 45394 | 15089275 ~ 15096339 (+) | False | LOC113530018 |
| XM_026919824.2 | mRNA | downstream | 59043 | 15102924 ~ 15111187 (+) | False | metap2b |
| XM_026919823.2 | mRNA | downstream | 59044 | 15102925 ~ 15111187 (+) | True | metap2b |
| XM_026919975.2 | mRNA | downstream | 83486 | 15127367 ~ 15132498 (+) | True | tmpob |
| trnar-ucg_5 | other | upstream | 1222471 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_003403080.2 | other | upstream | 1267950 | 13761334 ~ 13775183 (+) | False | ces2b |
| TU175114 | other | upstream | 1689880 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| TU174750 | other | upstream | 2125879 | 12916919 ~ 12917254 (+) | True | G147542 |
| XR_003403100.2 | other | upstream | 3739187 | 11295128 ~ 11303946 (+) | False | hrh2a |
| XR_004578669.1 | other | downstream | 764109 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
| XR_004578670.1 | other | downstream | 764109 | 15807990 ~ 15820156 (+) | False | LOC113529564 |
| XR_003403067.2 | other | downstream | 764109 | 15807990 ~ 15819573 (+) | False | LOC113529564 |
| trnav-aac_18 | other | downstream | 997294 | 16041175 ~ 16041247 (+) | True | trnav-aac_18 |
| TU178368 | other | downstream | 2790356 | 17834237 ~ 17842535 (+) | True | G150589 |
