RNA id: TU176301



Basic Information


Item Value
RNA id TU176301
length 551
RNA type TUCP
GC content 0.41
exon number 4
gene id dynlrb2
representative False

Chromosome Information


Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 15086113 ~ 15088060 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence


TTCCGTCTCCACACAGTAACGAAAAGCcacaacacaaagacacacacagggcagtGACTGCAGAGAATCATGGCTGAAGTGGAGGAAACACTGAAGAGGATTCAAGCACACAAAGGTGTTATAGGGACAATAGTTGTCAATGCTGAAGGTATTCCTATTAGAACGACACTGGACAATTCCACCACAGTGCAGTATGCAGGCTTACTTCATCAGCTCGCTATGAAAGCCAGGAGTACAGTTCGAGACATAGACCCTCAGAATGACCTCACTTTTCTGCGCGTCAGATCCAAGAAACATGAGATCATGGTGGCACCTGACAAAGAATATCTTCTGATAGTGATTCAGAACCCGAGCGAATAGGACTGAAGGACAGAATCAGCAAGCGCACACTTTATATCATACTTACTCATTTATCTTTTCATTGCTTTAGTGGTTTAATCTGCTTTCTGCACCTAAAATTGAATTTAACAGCATTTCTATCAAACATACACTTGTATACTTTTTAACCTTGCAAAAACACtttgtttaatgaaataaaatttcatcTGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU176283 lncRNA downstream 48661 15037225 ~ 15037462 (-) True G148833
TU176039 lncRNA downstream 403370 14681515 ~ 14682753 (-) True G148612
XR_003403103.2 lncRNA downstream 570596 14513165 ~ 14515527 (-) True LOC113530044
XR_003403104.2 lncRNA downstream 570703 14513165 ~ 14515420 (-) False LOC113530044
TU175779 lncRNA downstream 1064623 13998570 ~ 14021500 (-) True G148371
TU176393 lncRNA upstream 39216 15127232 ~ 15128055 (-) False G148926
TU176391 lncRNA upstream 39450 15127466 ~ 15128055 (-) False G148926
TU176392 lncRNA upstream 39450 15127466 ~ 15128506 (-) True G148926
TU176385 lncRNA upstream 42760 15130776 ~ 15132497 (-) True G148920
TU176384 lncRNA upstream 48110 15136126 ~ 15138007 (-) True G148919
XM_026919001.2 mRNA downstream 42285 14996108 ~ 15043838 (-) True LOC113529649
XM_026919002.2 mRNA downstream 52603 14996108 ~ 15033520 (-) False LOC113529649
XM_026919005.2 mRNA downstream 56217 14996108 ~ 15029906 (-) False LOC113529649
XM_026919000.2 mRNA downstream 66925 14996107 ~ 15019198 (-) False LOC113529649
XM_026919006.2 mRNA downstream 67211 14996108 ~ 15018912 (-) False LOC113529649
XM_026919687.2 mRNA upstream 6736 15094752 ~ 15098914 (-) True cib1
XM_026919074.2 mRNA upstream 25663 15113679 ~ 15114865 (-) True LOC113529696
XM_026920008.2 mRNA upstream 28006 15116022 ~ 15117778 (-) True pthlhb
XM_026919675.2 mRNA upstream 57396 15145412 ~ 15149282 (-) True golt1bb
XM_026919509.2 mRNA upstream 76549 15164565 ~ 15170707 (-) True gpr22b
TU176092 other downstream 273418 14810004 ~ 14812705 (-) True G148647
TU175596 other downstream 1253234 13825897 ~ 13832889 (-) False LOC113529512
trnar-acg_1 other downstream 1295578 13790473 ~ 13790545 (-) False trnar-acg_1
trnae-cuc_22 other downstream 1632651 13453401 ~ 13453472 (-) True trnae-cuc_22
TU175361 other downstream 1727985 13356236 ~ 13358138 (-) True G148019
XR_004578773.1 other upstream 132956 15220972 ~ 15228032 (-) False LOC113529695
XR_004578830.1 other upstream 902064 15990080 ~ 15992094 (-) False islr2
XR_003403120.2 other upstream 1665160 16753176 ~ 16753281 (-) True LOC113530224
TU177725 other upstream 1965350 17053366 ~ 17058906 (-) True LOC113529460
XR_003403060.1 other upstream 2666368 17754384 ~ 17760039 (-) True LOC113529452

Expression Profile