Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU176588 |
| length | 830 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G149091 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 15483074 ~ 15483903 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176586 | lncRNA | upstream | 1046 | 15481687 ~ 15482028 (+) | True | G149089 |
| TU176585 | lncRNA | upstream | 1504 | 15481252 ~ 15481570 (+) | True | G149088 |
| TU176517 | lncRNA | upstream | 31170 | 15451576 ~ 15451904 (+) | True | G149027 |
| XR_003403114.2 | lncRNA | upstream | 177689 | 15298770 ~ 15305385 (+) | True | LOC113530090 |
| TU176339 | lncRNA | upstream | 225564 | 15203735 ~ 15257510 (+) | True | G148881 |
| TU176631 | lncRNA | downstream | 79403 | 15563306 ~ 15652684 (+) | False | slc5a12 |
| TU176640 | lncRNA | downstream | 83933 | 15567836 ~ 15569487 (+) | True | G149131 |
| TU176794 | lncRNA | downstream | 227110 | 15711013 ~ 15711917 (+) | True | G149248 |
| TU176798 | lncRNA | downstream | 237445 | 15721348 ~ 15725091 (+) | True | svip |
| TU176815 | lncRNA | downstream | 270762 | 15754665 ~ 15754912 (+) | True | G149268 |
| XM_026919608.2 | mRNA | upstream | 34333 | 15446796 ~ 15448741 (+) | True | mphosph6 |
| XM_026919666.2 | mRNA | upstream | 37019 | 15444108 ~ 15446055 (+) | True | snx20 |
| XM_026919664.2 | mRNA | upstream | 37019 | 15444499 ~ 15446055 (+) | False | snx20 |
| XM_026918774.2 | mRNA | upstream | 49535 | 15427516 ~ 15433539 (+) | True | sall1b |
| XM_034307579.1 | mRNA | upstream | 61221 | 15411479 ~ 15421853 (+) | False | rbl2 |
| XM_026919060.2 | mRNA | downstream | 93280 | 15577183 ~ 15605737 (+) | True | lrrk2 |
| XM_026919062.2 | mRNA | downstream | 93280 | 15577183 ~ 15605737 (+) | False | lrrk2 |
| XM_034307317.1 | mRNA | downstream | 93280 | 15577183 ~ 15605737 (+) | False | lrrk2 |
| XM_026919061.2 | mRNA | downstream | 93280 | 15577183 ~ 15605737 (+) | False | lrrk2 |
| XM_026919063.2 | mRNA | downstream | 93280 | 15577183 ~ 15605737 (+) | False | lrrk2 |
| trnar-ucg_5 | other | upstream | 1662412 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_003403080.2 | other | upstream | 1707891 | 13761334 ~ 13775183 (+) | False | ces2b |
| TU175114 | other | upstream | 2129821 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| TU174750 | other | upstream | 2565820 | 12916919 ~ 12917254 (+) | True | G147542 |
| XR_003403100.2 | other | upstream | 4179128 | 11295128 ~ 11303946 (+) | False | hrh2a |
| XR_004578669.1 | other | downstream | 324087 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
| XR_004578670.1 | other | downstream | 324087 | 15807990 ~ 15820156 (+) | False | LOC113529564 |
| XR_003403067.2 | other | downstream | 324087 | 15807990 ~ 15819573 (+) | False | LOC113529564 |
| trnav-aac_18 | other | downstream | 557272 | 16041175 ~ 16041247 (+) | True | trnav-aac_18 |
| TU178368 | other | downstream | 2350334 | 17834237 ~ 17842535 (+) | True | G150589 |
