Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU176797 |
| length | 722 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 1 |
| gene id | LOC113529470 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 15711993 ~ 15719575 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176554 | lncRNA | downstream | 334891 | 15377203 ~ 15377406 (-) | True | G149057 |
| TU176480 | lncRNA | downstream | 380865 | 15331207 ~ 15331432 (-) | True | G148992 |
| TU176384 | lncRNA | downstream | 574290 | 15136126 ~ 15138007 (-) | True | G148919 |
| TU176385 | lncRNA | downstream | 579800 | 15130776 ~ 15132497 (-) | True | G148920 |
| TU176392 | lncRNA | downstream | 583791 | 15127466 ~ 15128506 (-) | True | G148926 |
| TU176862 | lncRNA | upstream | 12233 | 15725251 ~ 15725901 (-) | True | G149301 |
| TU176867 | lncRNA | upstream | 38141 | 15751159 ~ 15752470 (-) | True | G149305 |
| TU176874 | lncRNA | upstream | 45266 | 15758284 ~ 15758501 (-) | True | G149312 |
| TU176929 | lncRNA | upstream | 184872 | 15897890 ~ 15898161 (-) | True | G149363 |
| TU176930 | lncRNA | upstream | 189422 | 15902440 ~ 15902642 (-) | True | G149364 |
| XM_026918659.2 | mRNA | downstream | 3118 | 15652205 ~ 15709179 (-) | False | ano3 |
| XM_026918661.2 | mRNA | downstream | 3118 | 15652205 ~ 15709179 (-) | False | ano3 |
| XM_034307158.1 | mRNA | downstream | 3118 | 15652205 ~ 15709179 (-) | False | ano3 |
| XM_026918660.2 | mRNA | downstream | 3118 | 15652205 ~ 15709179 (-) | False | ano3 |
| XM_026918658.2 | mRNA | downstream | 3118 | 15652205 ~ 15709179 (-) | True | ano3 |
| XM_026918677.2 | mRNA | upstream | 13925 | 15726943 ~ 15749724 (-) | False | LOC113529473 |
| XM_026918679.2 | mRNA | upstream | 13925 | 15726943 ~ 15749724 (-) | False | LOC113529473 |
| XM_026918675.2 | mRNA | upstream | 13925 | 15726943 ~ 15749724 (-) | False | LOC113529473 |
| XM_026918676.2 | mRNA | upstream | 13925 | 15726943 ~ 15749724 (-) | True | LOC113529473 |
| XM_026918671.2 | mRNA | upstream | 46608 | 15759626 ~ 15769464 (-) | True | slc17a6a |
| XR_004578773.1 | other | downstream | 484265 | 15220972 ~ 15228032 (-) | False | LOC113529695 |
| TU176301 | other | downstream | 624281 | 15086123 ~ 15088016 (-) | False | dynlrb2 |
| TU176092 | other | downstream | 899592 | 14810004 ~ 14812705 (-) | True | G148647 |
| TU175596 | other | downstream | 1879408 | 13825897 ~ 13832889 (-) | False | LOC113529512 |
| trnar-acg_1 | other | downstream | 1921752 | 13790473 ~ 13790545 (-) | False | trnar-acg_1 |
| XR_004578830.1 | other | upstream | 277062 | 15990080 ~ 15992094 (-) | False | islr2 |
| XR_003403120.2 | other | upstream | 1040158 | 16753176 ~ 16753281 (-) | True | LOC113530224 |
| TU177725 | other | upstream | 1340348 | 17053366 ~ 17058906 (-) | True | LOC113529460 |
| XR_003403060.1 | other | upstream | 2041366 | 17754384 ~ 17760039 (-) | True | LOC113529452 |
| XR_003403059.2 | other | upstream | 2493135 | 18206153 ~ 18214487 (-) | False | fnbp4 |
