Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU176828 |
| length | 596 |
| lncRNA type | sense_over |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G149276 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 15771838 ~ 15818368 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176815 | lncRNA | upstream | 16926 | 15754665 ~ 15754912 (+) | True | G149268 |
| TU176798 | lncRNA | upstream | 46747 | 15721348 ~ 15725091 (+) | True | svip |
| TU176794 | lncRNA | upstream | 59921 | 15711013 ~ 15711917 (+) | True | G149248 |
| TU176631 | lncRNA | upstream | 119154 | 15563306 ~ 15652684 (+) | False | slc5a12 |
| TU176640 | lncRNA | upstream | 202351 | 15567836 ~ 15569487 (+) | True | G149131 |
| TU177010 | lncRNA | downstream | 206476 | 16024844 ~ 16026512 (+) | True | G149427 |
| TU177011 | lncRNA | downstream | 209239 | 16027607 ~ 16028019 (+) | True | G149428 |
| TU177169 | lncRNA | downstream | 436316 | 16254684 ~ 16255314 (+) | True | G149552 |
| TU177191 | lncRNA | downstream | 509888 | 16328256 ~ 16328539 (+) | True | G149574 |
| XR_004578685.1 | lncRNA | downstream | 520222 | 16338590 ~ 16341963 (+) | True | LOC117597940 |
| XM_026918674.2 | mRNA | upstream | 19312 | 15751139 ~ 15752526 (+) | True | fancf |
| XM_026918680.2 | mRNA | upstream | 46972 | 15721292 ~ 15724866 (+) | False | svip |
| XM_026918681.2 | mRNA | upstream | 48119 | 15721278 ~ 15723719 (+) | False | svip |
| XM_026919330.2 | mRNA | upstream | 119207 | 15644987 ~ 15652631 (+) | True | slc5a12 |
| XM_026919331.2 | mRNA | upstream | 136848 | 15631055 ~ 15634990 (+) | True | si:ch211-87j1.4 |
| XM_026919874.2 | mRNA | downstream | 13811 | 15832179 ~ 15841507 (+) | True | sigirr |
| XM_026919672.2 | mRNA | downstream | 56495 | 15874863 ~ 15882172 (+) | True | hexa |
| XM_034307515.1 | mRNA | downstream | 69739 | 15888107 ~ 15890739 (+) | True | nr2e3 |
| XM_026919786.2 | mRNA | downstream | 69739 | 15888107 ~ 15890739 (+) | False | nr2e3 |
| XM_026918758.2 | mRNA | downstream | 73285 | 15891653 ~ 15895454 (+) | True | stoml1 |
| trnar-ucg_5 | other | upstream | 1951176 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_003403080.2 | other | upstream | 1996655 | 13761334 ~ 13775183 (+) | False | ces2b |
| TU175114 | other | upstream | 2418585 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| TU174750 | other | upstream | 2854584 | 12916919 ~ 12917254 (+) | True | G147542 |
| XR_003403100.2 | other | upstream | 4467892 | 11295128 ~ 11303946 (+) | False | hrh2a |
| trnav-aac_18 | other | downstream | 222807 | 16041175 ~ 16041247 (+) | True | trnav-aac_18 |
| TU178368 | other | downstream | 2015869 | 17834237 ~ 17842535 (+) | True | G150589 |
| TU178369 | other | downstream | 2015869 | 17834237 ~ 17842535 (+) | False | G150589 |
| TU178370 | other | downstream | 2015869 | 17834237 ~ 17842535 (+) | False | G150589 |
| XR_004578809.1 | other | downstream | 2856642 | 18675010 ~ 18683428 (+) | False | rfwd3 |
