Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU177169 |
| length | 631 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G149552 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 16254684 ~ 16255314 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU177011 | lncRNA | upstream | 226665 | 16027607 ~ 16028019 (+) | True | G149428 |
| TU177010 | lncRNA | upstream | 228172 | 16024844 ~ 16026512 (+) | True | G149427 |
| TU176828 | lncRNA | upstream | 436316 | 15771838 ~ 15818368 (+) | True | G149276 |
| TU176815 | lncRNA | upstream | 499772 | 15754665 ~ 15754912 (+) | True | G149268 |
| TU176798 | lncRNA | upstream | 529593 | 15721348 ~ 15725091 (+) | True | svip |
| TU177191 | lncRNA | downstream | 72942 | 16328256 ~ 16328539 (+) | True | G149574 |
| XR_004578685.1 | lncRNA | downstream | 83276 | 16338590 ~ 16341963 (+) | True | LOC117597940 |
| TU177372 | lncRNA | downstream | 184392 | 16439706 ~ 16440054 (+) | True | G149722 |
| TU177373 | lncRNA | downstream | 190725 | 16446039 ~ 16449140 (+) | True | G149723 |
| XR_004578660.1 | lncRNA | downstream | 205066 | 16460380 ~ 16474228 (+) | True | LOC117597920 |
| XM_026919443.2 | mRNA | upstream | 3609 | 16242248 ~ 16251075 (+) | True | rab8b |
| XM_026918914.2 | mRNA | upstream | 19303 | 16231335 ~ 16235381 (+) | True | dnaja |
| XM_026918916.2 | mRNA | upstream | 35050 | 16209778 ~ 16219634 (+) | False | idh3a |
| XM_026918915.2 | mRNA | upstream | 35050 | 16209828 ~ 16219634 (+) | True | idh3a |
| XM_026919649.2 | mRNA | upstream | 48234 | 16202775 ~ 16206450 (+) | True | lrrc61 |
| XM_026919054.2 | mRNA | downstream | 41279 | 16296593 ~ 16311059 (+) | True | klf13 |
| XM_026919260.2 | mRNA | downstream | 145528 | 16400842 ~ 16421690 (+) | True | LOC113529796 |
| XM_026919261.2 | mRNA | downstream | 167309 | 16422623 ~ 16424388 (+) | True | gcnt3 |
| XM_026919602.2 | mRNA | downstream | 243210 | 16498524 ~ 16500108 (+) | True | foxb1a |
| XM_026918983.2 | mRNA | downstream | 640396 | 16895710 ~ 17009651 (+) | False | tln2b |
| trnav-aac_18 | other | upstream | 213437 | 16041175 ~ 16041247 (+) | True | trnav-aac_18 |
| XR_004578669.1 | other | upstream | 432093 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
| XR_004578670.1 | other | upstream | 434528 | 15807990 ~ 15820156 (+) | False | LOC113529564 |
| XR_003403067.2 | other | upstream | 435111 | 15807990 ~ 15819573 (+) | False | LOC113529564 |
| trnar-ucg_5 | other | upstream | 2434022 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| TU178368 | other | downstream | 1578923 | 17834237 ~ 17842535 (+) | True | G150589 |
| TU178369 | other | downstream | 1578923 | 17834237 ~ 17842535 (+) | False | G150589 |
| TU178370 | other | downstream | 1578923 | 17834237 ~ 17842535 (+) | False | G150589 |
| XR_004578809.1 | other | downstream | 2419696 | 18675010 ~ 18683428 (+) | False | rfwd3 |
| TU178953 | other | downstream | 2466281 | 18721595 ~ 18724686 (+) | True | urahb |
