Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU177243 |
| length | 234 |
| lncRNA type | read_through |
| GC content | 0.31 |
| exon number | 2 |
| gene id | acsbg1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 16141119 ~ 16228334 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU177091 | lncRNA | downstream | 45944 | 16093072 ~ 16095175 (-) | True | G149495 |
| XR_004578675.1 | lncRNA | downstream | 48189 | 16068429 ~ 16092930 (-) | False | LOC113529609 |
| XR_003403074.2 | lncRNA | downstream | 48189 | 16068429 ~ 16092930 (-) | True | LOC113529609 |
| TU176932 | lncRNA | downstream | 237217 | 15903692 ~ 15903902 (-) | True | G149366 |
| TU176930 | lncRNA | downstream | 238477 | 15902440 ~ 15902642 (-) | True | G149364 |
| TU177246 | lncRNA | upstream | 5355 | 16224977 ~ 16228293 (-) | False | acsbg1 |
| XR_004578686.1 | lncRNA | upstream | 10992 | 16230614 ~ 16231809 (-) | True | LOC117597941 |
| TU177252 | lncRNA | upstream | 13807 | 16233429 ~ 16238108 (-) | False | G149631 |
| TU177268 | lncRNA | upstream | 29539 | 16249161 ~ 16251085 (-) | True | G149643 |
| TU177277 | lncRNA | upstream | 35025 | 16254647 ~ 16255486 (-) | True | G149649 |
| XM_026918885.2 | mRNA | downstream | 215 | 16121657 ~ 16140904 (-) | False | dapk2b |
| XM_026918887.2 | mRNA | downstream | 215 | 16122648 ~ 16140904 (-) | False | dapk2b |
| XM_026918888.2 | mRNA | downstream | 215 | 16123400 ~ 16140904 (-) | True | dapk2b |
| XM_026918886.2 | mRNA | downstream | 220 | 16121657 ~ 16140899 (-) | False | dapk2b |
| XM_034307143.1 | mRNA | downstream | 97267 | 16032911 ~ 16043852 (-) | False | ca12 |
| XM_026918917.2 | mRNA | upstream | 16521 | 16236143 ~ 16238157 (-) | True | rps27l |
| XM_026919995.2 | mRNA | upstream | 31722 | 16251344 ~ 16254496 (-) | True | LOC113530180 |
| XM_026919070.2 | mRNA | upstream | 36888 | 16256510 ~ 16262939 (-) | True | LOC113529693 |
| XM_026919996.2 | mRNA | upstream | 45940 | 16265562 ~ 16267986 (-) | True | trpm1b |
| XM_026919384.2 | mRNA | upstream | 106320 | 16325942 ~ 16362375 (-) | True | otud7a |
| XR_004578830.1 | other | downstream | 149025 | 15990080 ~ 15992094 (-) | False | islr2 |
| XR_004578773.1 | other | downstream | 913087 | 15220972 ~ 15228032 (-) | False | LOC113529695 |
| TU176301 | other | downstream | 1053103 | 15086123 ~ 15088016 (-) | False | dynlrb2 |
| TU176092 | other | downstream | 1328414 | 14810004 ~ 14812705 (-) | True | G148647 |
| TU175596 | other | downstream | 2308230 | 13825897 ~ 13832889 (-) | False | LOC113529512 |
| XR_003403120.2 | other | upstream | 533554 | 16753176 ~ 16753281 (-) | True | LOC113530224 |
| TU177725 | other | upstream | 833744 | 17053366 ~ 17058906 (-) | True | LOC113529460 |
| XR_003403060.1 | other | upstream | 1534762 | 17754384 ~ 17760039 (-) | True | LOC113529452 |
| XR_003403059.2 | other | upstream | 1986531 | 18206153 ~ 18214487 (-) | False | fnbp4 |
| XR_003403119.2 | other | upstream | 2085016 | 18304638 ~ 18304801 (-) | True | LOC113530223 |
