Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU177511 |
| length | 439 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G149841 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 16496171 ~ 16498461 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU177505 | lncRNA | downstream | 35126 | 16460791 ~ 16461045 (-) | True | G149836 |
| TU177366 | lncRNA | downstream | 71567 | 16422666 ~ 16424604 (-) | True | G149718 |
| TU177254 | lncRNA | downstream | 178245 | 16309890 ~ 16317926 (-) | True | G149632 |
| TU177277 | lncRNA | downstream | 240685 | 16254647 ~ 16255486 (-) | True | G149649 |
| TU177268 | lncRNA | downstream | 245086 | 16249161 ~ 16251085 (-) | True | G149643 |
| TU177528 | lncRNA | upstream | 114523 | 16612984 ~ 16614416 (-) | True | G149854 |
| TU177779 | lncRNA | upstream | 520495 | 17018956 ~ 17019183 (-) | True | G150089 |
| TU177718 | lncRNA | upstream | 529656 | 17028117 ~ 17042478 (-) | True | G150036 |
| TU177721 | lncRNA | upstream | 529656 | 17028117 ~ 17052512 (-) | False | G150036 |
| TU177720 | lncRNA | upstream | 532095 | 17030556 ~ 17042478 (-) | False | G150036 |
| XM_026918976.2 | mRNA | downstream | 37776 | 16443455 ~ 16458395 (-) | False | bnip2 |
| XM_026918977.2 | mRNA | downstream | 37776 | 16443455 ~ 16458395 (-) | False | bnip2 |
| XM_026918974.2 | mRNA | downstream | 37776 | 16443455 ~ 16458395 (-) | False | bnip2 |
| XM_034307284.1 | mRNA | downstream | 37776 | 16443455 ~ 16458395 (-) | True | bnip2 |
| XM_026919384.2 | mRNA | downstream | 133796 | 16325942 ~ 16362375 (-) | True | otud7a |
| XM_026919690.2 | mRNA | upstream | 42391 | 16540852 ~ 16546270 (-) | True | anxa2a |
| XM_026919801.2 | mRNA | upstream | 48864 | 16547325 ~ 16566002 (-) | True | ice2 |
| XM_034307590.1 | mRNA | upstream | 48864 | 16547325 ~ 16562803 (-) | False | ice2 |
| XM_034307591.1 | mRNA | upstream | 48864 | 16547325 ~ 16562788 (-) | False | ice2 |
| XM_026918892.2 | mRNA | upstream | 68834 | 16567295 ~ 16800368 (-) | True | roraa |
| XR_004578830.1 | other | downstream | 504077 | 15990080 ~ 15992094 (-) | False | islr2 |
| XR_004578773.1 | other | downstream | 1268139 | 15220972 ~ 15228032 (-) | False | LOC113529695 |
| TU176301 | other | downstream | 1408155 | 15086123 ~ 15088016 (-) | False | dynlrb2 |
| TU176092 | other | downstream | 1683466 | 14810004 ~ 14812705 (-) | True | G148647 |
| TU175596 | other | downstream | 2663282 | 13825897 ~ 13832889 (-) | False | LOC113529512 |
| XR_003403120.2 | other | upstream | 254715 | 16753176 ~ 16753281 (-) | True | LOC113530224 |
| TU177725 | other | upstream | 554905 | 17053366 ~ 17058906 (-) | True | LOC113529460 |
| XR_003403060.1 | other | upstream | 1255923 | 17754384 ~ 17760039 (-) | True | LOC113529452 |
| XR_003403059.2 | other | upstream | 1707692 | 18206153 ~ 18214487 (-) | False | fnbp4 |
| XR_003403119.2 | other | upstream | 1806177 | 18304638 ~ 18304801 (-) | True | LOC113530223 |
