Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034307204.1 |
| length | 945 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 5 |
| gene id | LOC113529460 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 17053353 ~ 17058906 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU177721 | lncRNA | downstream | 841 | 17028117 ~ 17052512 (-) | False | G150036 |
| TU177718 | lncRNA | downstream | 10875 | 17028117 ~ 17042478 (-) | True | G150036 |
| TU177720 | lncRNA | downstream | 10875 | 17030556 ~ 17042478 (-) | False | G150036 |
| TU177779 | lncRNA | downstream | 34170 | 17018956 ~ 17019183 (-) | True | G150089 |
| TU177528 | lncRNA | downstream | 438937 | 16612984 ~ 16614416 (-) | True | G149854 |
| XR_004578684.1 | lncRNA | upstream | 16379 | 17075246 ~ 17078085 (-) | True | LOC117597939 |
| TU177820 | lncRNA | upstream | 66547 | 17125414 ~ 17150481 (-) | True | G150130 |
| TU177833 | lncRNA | upstream | 89034 | 17147901 ~ 17148608 (-) | True | G150139 |
| TU177974 | lncRNA | upstream | 306583 | 17365450 ~ 17365787 (-) | True | G150237 |
| TU178033 | lncRNA | upstream | 382006 | 17440873 ~ 17444825 (-) | True | G150284 |
| XM_026919726.2 | mRNA | downstream | 163346 | 16888337 ~ 16890007 (-) | True | c2cd4a |
| XM_026918892.2 | mRNA | downstream | 252985 | 16567295 ~ 16800368 (-) | True | roraa |
| XM_026918893.2 | mRNA | downstream | 423052 | 16567295 ~ 16630301 (-) | False | roraa |
| XM_026919801.2 | mRNA | downstream | 487351 | 16547325 ~ 16566002 (-) | True | ice2 |
| XM_034307590.1 | mRNA | downstream | 490550 | 16547325 ~ 16562803 (-) | False | ice2 |
| XM_026918650.2 | mRNA | upstream | 54887 | 17113754 ~ 17128284 (-) | True | etfa |
| XM_034307342.1 | mRNA | upstream | 81548 | 17140415 ~ 17234857 (-) | True | scaper |
| XM_034307344.1 | mRNA | upstream | 81548 | 17140415 ~ 17234856 (-) | False | scaper |
| XM_034307343.1 | mRNA | upstream | 81548 | 17140415 ~ 17230041 (-) | False | scaper |
| XM_026919907.2 | mRNA | upstream | 178246 | 17237113 ~ 17248412 (-) | True | ctdspl2a |
| XR_003403120.2 | other | downstream | 300072 | 16753176 ~ 16753281 (-) | True | LOC113530224 |
| XR_004578830.1 | other | downstream | 1061259 | 15990080 ~ 15992094 (-) | False | islr2 |
| XR_004578773.1 | other | downstream | 1825321 | 15220972 ~ 15228032 (-) | False | LOC113529695 |
| TU176301 | other | downstream | 1965337 | 15086123 ~ 15088016 (-) | False | dynlrb2 |
| TU176092 | other | downstream | 2240648 | 14810004 ~ 14812705 (-) | True | G148647 |
| XR_003403060.1 | other | upstream | 695517 | 17754384 ~ 17760039 (-) | True | LOC113529452 |
| XR_003403059.2 | other | upstream | 1147286 | 18206153 ~ 18214487 (-) | False | fnbp4 |
| XR_003403119.2 | other | upstream | 1245771 | 18304638 ~ 18304801 (-) | True | LOC113530223 |
| XR_004578649.1 | other | upstream | 1296132 | 18354999 ~ 18364036 (-) | False | parp6b |
| TU178843 | other | upstream | 1366452 | 18425319 ~ 18428973 (-) | True | G150991 |
