Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU177779 |
| length | 228 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G150089 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 17018956 ~ 17019183 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU177528 | lncRNA | downstream | 404540 | 16612984 ~ 16614416 (-) | True | G149854 |
| TU177511 | lncRNA | downstream | 520495 | 16496171 ~ 16498461 (-) | True | G149841 |
| TU177505 | lncRNA | downstream | 557911 | 16460791 ~ 16461045 (-) | True | G149836 |
| TU177366 | lncRNA | downstream | 594352 | 16422666 ~ 16424604 (-) | True | G149718 |
| TU177254 | lncRNA | downstream | 701030 | 16309890 ~ 16317926 (-) | True | G149632 |
| TU177718 | lncRNA | upstream | 8934 | 17028117 ~ 17042478 (-) | True | G150036 |
| TU177721 | lncRNA | upstream | 8934 | 17028117 ~ 17052512 (-) | False | G150036 |
| TU177720 | lncRNA | upstream | 11373 | 17030556 ~ 17042478 (-) | False | G150036 |
| XR_004578684.1 | lncRNA | upstream | 56063 | 17075246 ~ 17078085 (-) | True | LOC117597939 |
| TU177820 | lncRNA | upstream | 106231 | 17125414 ~ 17150481 (-) | True | G150130 |
| XM_026919726.2 | mRNA | downstream | 128949 | 16888337 ~ 16890007 (-) | True | c2cd4a |
| XM_026918892.2 | mRNA | downstream | 218588 | 16567295 ~ 16800368 (-) | True | roraa |
| XM_026918893.2 | mRNA | downstream | 388655 | 16567295 ~ 16630301 (-) | False | roraa |
| XM_026919801.2 | mRNA | downstream | 452954 | 16547325 ~ 16566002 (-) | True | ice2 |
| XM_034307590.1 | mRNA | downstream | 456153 | 16547325 ~ 16562803 (-) | False | ice2 |
| XM_034307204.1 | mRNA | upstream | 34170 | 17053353 ~ 17058867 (-) | False | LOC113529460 |
| XM_026918652.2 | mRNA | upstream | 34170 | 17053353 ~ 17058864 (-) | False | LOC113529460 |
| XM_026918650.2 | mRNA | upstream | 94571 | 17113754 ~ 17128284 (-) | True | etfa |
| XM_034307342.1 | mRNA | upstream | 121232 | 17140415 ~ 17234857 (-) | True | scaper |
| XM_034307344.1 | mRNA | upstream | 121232 | 17140415 ~ 17234856 (-) | False | scaper |
| XR_003403120.2 | other | downstream | 265675 | 16753176 ~ 16753281 (-) | True | LOC113530224 |
| XR_004578830.1 | other | downstream | 1026862 | 15990080 ~ 15992094 (-) | False | islr2 |
| XR_004578773.1 | other | downstream | 1790924 | 15220972 ~ 15228032 (-) | False | LOC113529695 |
| TU176301 | other | downstream | 1930940 | 15086123 ~ 15088016 (-) | False | dynlrb2 |
| TU176092 | other | downstream | 2206251 | 14810004 ~ 14812705 (-) | True | G148647 |
| TU177725 | other | upstream | 34183 | 17053366 ~ 17058906 (-) | True | LOC113529460 |
| XR_003403060.1 | other | upstream | 735201 | 17754384 ~ 17760039 (-) | True | LOC113529452 |
| XR_003403059.2 | other | upstream | 1186970 | 18206153 ~ 18214487 (-) | False | fnbp4 |
| XR_003403119.2 | other | upstream | 1285455 | 18304638 ~ 18304801 (-) | True | LOC113530223 |
| XR_004578649.1 | other | upstream | 1335816 | 18354999 ~ 18364036 (-) | False | parp6b |
