Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU178372 |
| length | 751 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G150590 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 17832766 ~ 17840449 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU178163 | lncRNA | upstream | 130008 | 17702554 ~ 17702758 (+) | True | G150407 |
| TU178012 | lncRNA | upstream | 375631 | 17456920 ~ 17457135 (+) | True | G150268 |
| TU178009 | lncRNA | upstream | 386306 | 17446249 ~ 17446460 (+) | True | G150265 |
| TU178004 | lncRNA | upstream | 398389 | 17430143 ~ 17434377 (+) | True | G150261 |
| TU177846 | lncRNA | upstream | 577429 | 17253667 ~ 17255337 (+) | True | G150152 |
| TU178374 | lncRNA | downstream | 71188 | 17911637 ~ 17912583 (+) | True | G150592 |
| TU178394 | lncRNA | downstream | 74176 | 17914625 ~ 17915242 (+) | True | G150609 |
| XR_004578772.1 | lncRNA | downstream | 290397 | 18130846 ~ 18139145 (+) | True | LOC117598020 |
| TU178595 | lncRNA | downstream | 342106 | 18182555 ~ 18184010 (+) | True | tmem17 |
| TU178695 | lncRNA | downstream | 501794 | 18342243 ~ 18345729 (+) | True | G150873 |
| XM_026919317.2 | mRNA | upstream | 20802 | 17806125 ~ 17811964 (+) | True | gpr37a |
| XM_026919314.2 | mRNA | upstream | 28968 | 17760318 ~ 17803798 (+) | False | pot1 |
| XM_026919312.2 | mRNA | upstream | 28968 | 17760351 ~ 17803798 (+) | True | pot1 |
| XM_026919315.2 | mRNA | upstream | 28968 | 17760351 ~ 17803798 (+) | False | pot1 |
| XM_034307356.1 | mRNA | upstream | 28968 | 17760413 ~ 17803798 (+) | False | pot1 |
| XM_026919222.2 | mRNA | downstream | 50438 | 17890887 ~ 17910861 (+) | True | wasla |
| XM_026919510.2 | mRNA | downstream | 81106 | 17921555 ~ 17931146 (+) | True | iqub |
| XM_026919511.2 | mRNA | downstream | 93841 | 17934290 ~ 17942955 (+) | True | slc13a1 |
| XM_034307324.1 | mRNA | downstream | 108842 | 17949291 ~ 18079622 (+) | True | cadps2 |
| XM_034307325.1 | mRNA | downstream | 108842 | 17949291 ~ 18079622 (+) | False | cadps2 |
| trnav-aac_18 | other | upstream | 1791519 | 16041175 ~ 16041247 (+) | True | trnav-aac_18 |
| XR_004578669.1 | other | upstream | 2010175 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
| XR_004578670.1 | other | upstream | 2012610 | 15807990 ~ 15820156 (+) | False | LOC113529564 |
| XR_003403067.2 | other | upstream | 2013193 | 15807990 ~ 15819573 (+) | False | LOC113529564 |
| trnar-ucg_5 | other | upstream | 4012104 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_004578809.1 | other | downstream | 834561 | 18675010 ~ 18683428 (+) | False | rfwd3 |
| TU178953 | other | downstream | 881146 | 18721595 ~ 18724686 (+) | True | urahb |
| XR_004578793.1 | other | downstream | 1236146 | 19076595 ~ 19077868 (+) | True | LOC117598072 |
| TU179056 | other | downstream | 1280715 | 19121164 ~ 19125132 (+) | False | faap24 |
| TU179313 | other | downstream | 1420175 | 19260624 ~ 19263893 (+) | True | G151401 |
