Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026920019.2 |
| length | 896 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 5 |
| gene id | tmem17 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 18182554 ~ 18184033 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007224 | smoothened signaling pathway | biological_process |
| GO:0036038 | MKS complex | cellular_component |
| GO:0060170 | ciliary membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578772.1 | lncRNA | upstream | 43409 | 18130846 ~ 18139145 (+) | True | LOC117598020 |
| TU178394 | lncRNA | upstream | 267312 | 17914625 ~ 17915242 (+) | True | G150609 |
| TU178374 | lncRNA | upstream | 269971 | 17911637 ~ 17912583 (+) | True | G150592 |
| TU178372 | lncRNA | upstream | 342105 | 17832766 ~ 17840449 (+) | True | G150590 |
| TU178163 | lncRNA | upstream | 479796 | 17702554 ~ 17702758 (+) | True | G150407 |
| TU178695 | lncRNA | downstream | 158210 | 18342243 ~ 18345729 (+) | True | G150873 |
| TU178734 | lncRNA | downstream | 182849 | 18366882 ~ 18367108 (+) | True | G150900 |
| TU178777 | lncRNA | downstream | 239525 | 18423558 ~ 18424220 (+) | True | G150933 |
| TU178775 | lncRNA | downstream | 241284 | 18425317 ~ 18444052 (+) | False | G150932 |
| TU178776 | lncRNA | downstream | 241284 | 18425317 ~ 18444052 (+) | True | G150932 |
| XM_026919805.2 | mRNA | upstream | 1907 | 18171931 ~ 18180647 (+) | True | slc15a5 |
| XM_026919209.2 | mRNA | upstream | 71110 | 18089100 ~ 18111444 (+) | True | aass |
| XM_026919753.2 | mRNA | upstream | 95819 | 18082942 ~ 18086735 (+) | True | fezf1 |
| XM_026919049.2 | mRNA | upstream | 102932 | 17949292 ~ 18079622 (+) | False | cadps2 |
| XM_026918631.2 | mRNA | downstream | 30090 | 18214123 ~ 18227661 (+) | False | cnot2 |
| XM_026918633.2 | mRNA | downstream | 30090 | 18214123 ~ 18227661 (+) | False | cnot2 |
| XM_034307357.1 | mRNA | downstream | 30090 | 18214123 ~ 18225815 (+) | False | cnot2 |
| XM_026918634.2 | mRNA | downstream | 35822 | 18219855 ~ 18227661 (+) | True | cnot2 |
| XM_034307359.1 | mRNA | downstream | 61537 | 18245570 ~ 18254770 (+) | False | slc41a2a |
| TU178368 | other | upstream | 340019 | 17834237 ~ 17842535 (+) | True | G150589 |
| TU178369 | other | upstream | 340019 | 17834237 ~ 17842535 (+) | False | G150589 |
| TU178370 | other | upstream | 340019 | 17834237 ~ 17842535 (+) | False | G150589 |
| trnav-aac_18 | other | upstream | 2141307 | 16041175 ~ 16041247 (+) | True | trnav-aac_18 |
| XR_003403067.2 | other | upstream | 2362981 | 15807990 ~ 15819573 (+) | False | LOC113529564 |
| XR_004578809.1 | other | downstream | 490977 | 18675010 ~ 18683428 (+) | False | rfwd3 |
| TU178953 | other | downstream | 537562 | 18721595 ~ 18724686 (+) | True | urahb |
| XR_004578793.1 | other | downstream | 892562 | 19076595 ~ 19077868 (+) | True | LOC117598072 |
| TU179056 | other | downstream | 937131 | 19121164 ~ 19125132 (+) | False | faap24 |
| TU179313 | other | downstream | 1076591 | 19260624 ~ 19263893 (+) | True | G151401 |
