Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU178625 |
| length | 664 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 1 |
| gene id | fnbp4 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 18204651 ~ 18214487 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU178583 | lncRNA | downstream | 92176 | 18112252 ~ 18112477 (-) | True | G150776 |
| TU178426 | lncRNA | downstream | 291798 | 17912640 ~ 17912855 (-) | True | G150631 |
| TU178319 | lncRNA | downstream | 444954 | 17759421 ~ 17759699 (-) | True | G150551 |
| TU178258 | lncRNA | downstream | 505569 | 17698687 ~ 17699084 (-) | True | G150495 |
| TU178231 | lncRNA | downstream | 548864 | 17655589 ~ 17655789 (-) | True | G150469 |
| TU178654 | lncRNA | upstream | 49759 | 18255075 ~ 18255418 (-) | True | G150834 |
| TU178674 | lncRNA | upstream | 95977 | 18301293 ~ 18302959 (-) | True | G150854 |
| TU178677 | lncRNA | upstream | 99593 | 18304909 ~ 18305279 (-) | False | etfbkmt |
| TU178697 | lncRNA | upstream | 100893 | 18306209 ~ 18306443 (-) | True | G150875 |
| TU178713 | lncRNA | upstream | 133186 | 18338502 ~ 18338714 (-) | True | G150891 |
| XM_026920016.2 | mRNA | downstream | 2028 | 18184111 ~ 18202625 (-) | False | agbl2 |
| XM_026920017.2 | mRNA | downstream | 2028 | 18184111 ~ 18202625 (-) | True | agbl2 |
| XM_026920018.2 | mRNA | downstream | 2029 | 18184111 ~ 18202624 (-) | False | agbl2 |
| XM_026919207.2 | mRNA | downstream | 39843 | 18113006 ~ 18164810 (-) | False | ptprz1a |
| XM_026919206.2 | mRNA | downstream | 39843 | 18113006 ~ 18164810 (-) | False | ptprz1a |
| XM_026918637.1 | mRNA | upstream | 10917 | 18216233 ~ 18218741 (-) | False | lrrc10 |
| XM_026918636.2 | mRNA | upstream | 10917 | 18216233 ~ 18218280 (-) | False | lrrc10 |
| XM_026918635.2 | mRNA | upstream | 10917 | 18216233 ~ 18218274 (-) | True | lrrc10 |
| XM_026919382.2 | mRNA | upstream | 22797 | 18228113 ~ 18245704 (-) | True | washc4 |
| XM_026920049.2 | mRNA | upstream | 97826 | 18303142 ~ 18305329 (-) | True | etfbkmt |
| XR_003403060.1 | other | downstream | 444614 | 17754384 ~ 17760039 (-) | True | LOC113529452 |
| TU177725 | other | downstream | 1145747 | 17053366 ~ 17058906 (-) | True | LOC113529460 |
| XR_003403120.2 | other | downstream | 1451372 | 16753176 ~ 16753281 (-) | True | LOC113530224 |
| XR_004578830.1 | other | downstream | 2212559 | 15990080 ~ 15992094 (-) | False | islr2 |
| XR_004578773.1 | other | downstream | 2976621 | 15220972 ~ 15228032 (-) | False | LOC113529695 |
| XR_003403059.2 | other | upstream | 837 | 18206153 ~ 18214487 (-) | False | fnbp4 |
| XR_003403119.2 | other | upstream | 99322 | 18304638 ~ 18304801 (-) | True | LOC113530223 |
| XR_004578649.1 | other | upstream | 149683 | 18354999 ~ 18364036 (-) | False | parp6b |
| TU178843 | other | upstream | 220003 | 18425319 ~ 18428973 (-) | True | G150991 |
| trnat-agu_10 | other | upstream | 936927 | 19142243 ~ 19142316 (-) | True | trnat-agu_10 |
