Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026919585.2 |
| length | 1162 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 5 |
| gene id | faap24 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 19121151 ~ 19125201 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0006281 | DNA repair | biological_process |
| GO:0043240 | Fanconi anaemia nuclear complex | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| id | description |
|---|---|
| K10898 | FAAP24; fanconi anemia-associated protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU179021 | lncRNA | upstream | 10178 | 19109843 ~ 19110973 (+) | True | G151134 |
| TU178969 | lncRNA | upstream | 123219 | 18955049 ~ 18997932 (+) | True | G151084 |
| TU178978 | lncRNA | upstream | 175209 | 18945275 ~ 18945942 (+) | True | G151093 |
| TU178948 | lncRNA | upstream | 324912 | 18747827 ~ 18796239 (+) | False | nfat5a |
| XR_004578835.1 | lncRNA | upstream | 500330 | 18601539 ~ 18620821 (+) | True | LOC113530068 |
| TU179305 | lncRNA | downstream | 101448 | 19226649 ~ 19227893 (+) | True | G151395 |
| TU179336 | lncRNA | downstream | 192785 | 19317986 ~ 19393161 (+) | True | G151417 |
| TU179337 | lncRNA | downstream | 192785 | 19317986 ~ 19393161 (+) | False | G151417 |
| TU179341 | lncRNA | downstream | 268673 | 19393874 ~ 19397489 (+) | True | G151419 |
| TU179343 | lncRNA | downstream | 273077 | 19398278 ~ 19400388 (+) | True | G151421 |
| XM_026919185.2 | mRNA | upstream | 141692 | 18806928 ~ 18979459 (+) | False | wwox |
| XM_026919183.2 | mRNA | upstream | 159176 | 18806934 ~ 18961975 (+) | True | wwox |
| XM_034307290.1 | mRNA | upstream | 185918 | 18806932 ~ 18935233 (+) | False | wwox |
| XM_026919184.2 | mRNA | upstream | 247960 | 18806926 ~ 18873191 (+) | False | wwox |
| XM_034307289.1 | mRNA | upstream | 261816 | 18806927 ~ 18859335 (+) | False | wwox |
| XM_026919998.2 | mRNA | downstream | 1678 | 19126879 ~ 19140940 (+) | True | slc7a10b |
| XM_034307366.1 | mRNA | downstream | 23866 | 19149067 ~ 19154118 (+) | False | zgc:153293 |
| XM_026919609.2 | mRNA | downstream | 23866 | 19149067 ~ 19154108 (+) | True | zgc:153293 |
| XM_026919610.2 | mRNA | downstream | 23866 | 19149067 ~ 19154106 (+) | False | zgc:153293 |
| XM_026919362.2 | mRNA | downstream | 29090 | 19154291 ~ 19162148 (+) | True | LOC113529841 |
| XR_004578793.1 | other | upstream | 43283 | 19076595 ~ 19077868 (+) | True | LOC117598072 |
| TU178953 | other | upstream | 396465 | 18721595 ~ 18724686 (+) | True | urahb |
| XR_004578809.1 | other | upstream | 437723 | 18675010 ~ 18683428 (+) | False | rfwd3 |
| TU178368 | other | upstream | 1278616 | 17834237 ~ 17842535 (+) | True | G150589 |
| TU179313 | other | downstream | 135423 | 19260624 ~ 19263893 (+) | True | G151401 |
| XR_004578759.1 | other | downstream | 224417 | 19349618 ~ 19384904 (+) | False | srpk2 |
| TU181223 | other | downstream | 2927413 | 22052614 ~ 22058158 (+) | True | LOC113529593 |
| TU181225 | other | downstream | 2927413 | 22052614 ~ 22058158 (+) | False | LOC113529593 |
| TU181233 | other | downstream | 2951670 | 22076871 ~ 22078453 (+) | False | arpp19b |
