Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU181281 |
| length | 434 |
| RNA type | TUCP |
| GC content | 0.62 |
| exon number | 2 |
| gene id | G153014 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 22216275 ~ 22266382 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU181279 | lncRNA | upstream | 773 | 22215254 ~ 22215502 (+) | True | G153013 |
| TU181253 | lncRNA | upstream | 55403 | 22160658 ~ 22160872 (+) | True | G152987 |
| TU181251 | lncRNA | upstream | 57621 | 22158432 ~ 22158654 (+) | True | G152985 |
| TU181250 | lncRNA | upstream | 58179 | 22157867 ~ 22158096 (+) | True | G152984 |
| TU181081 | lncRNA | upstream | 404676 | 21810911 ~ 21811599 (+) | True | G152838 |
| TU181333 | lncRNA | downstream | 38376 | 22304758 ~ 22306096 (+) | True | G153063 |
| TU181325 | lncRNA | downstream | 174253 | 22440635 ~ 22446112 (+) | False | syt7a |
| XR_003403086.2 | lncRNA | downstream | 282590 | 22548972 ~ 22550482 (+) | True | LOC113529793 |
| TU181652 | lncRNA | downstream | 333478 | 22599860 ~ 22601027 (+) | False | LOC113529801 |
| TU181779 | lncRNA | downstream | 506313 | 22772695 ~ 22772903 (+) | True | G153439 |
| XM_026919643.2 | mRNA | upstream | 25472 | 22184002 ~ 22190803 (+) | True | drd4a |
| XM_026919923.2 | mRNA | upstream | 59477 | 22139633 ~ 22156798 (+) | True | ap4e1 |
| XM_026918712.2 | mRNA | upstream | 79183 | 22129488 ~ 22137092 (+) | True | gnb5a |
| XM_026918852.2 | mRNA | upstream | 87484 | 22108347 ~ 22128791 (+) | True | myo5c |
| XM_026918853.2 | mRNA | upstream | 87484 | 22112493 ~ 22128791 (+) | False | myo5c |
| XM_026920006.2 | mRNA | downstream | 17290 | 22283672 ~ 22296360 (+) | False | pidd1 |
| XM_026920005.2 | mRNA | downstream | 17317 | 22283699 ~ 22296360 (+) | False | pidd1 |
| XM_026920003.2 | mRNA | downstream | 17335 | 22283717 ~ 22296360 (+) | True | pidd1 |
| XM_026920004.2 | mRNA | downstream | 17508 | 22283890 ~ 22296360 (+) | False | pidd1 |
| XM_026919344.2 | mRNA | downstream | 30645 | 22297027 ~ 22326565 (+) | True | slc25a22a |
| TU181233 | other | upstream | 137822 | 22076871 ~ 22078453 (+) | False | arpp19b |
| TU181234 | other | upstream | 137822 | 22076871 ~ 22078453 (+) | False | arpp19b |
| TU181223 | other | upstream | 158117 | 22052614 ~ 22058158 (+) | True | LOC113529593 |
| TU181225 | other | upstream | 158117 | 22052614 ~ 22058158 (+) | False | LOC113529593 |
| XR_004578759.1 | other | upstream | 2831371 | 19349618 ~ 19384904 (+) | False | srpk2 |
| XR_004578680.1 | other | downstream | 2083386 | 24349768 ~ 24365372 (+) | False | LOC113530000 |
| XR_004578829.1 | other | downstream | 2148523 | 24414905 ~ 24435079 (+) | False | fcsk |
| TU182634 | other | downstream | 2166355 | 24432737 ~ 24434974 (+) | False | fcsk |
| XR_003403124.1 | other | downstream | 2180688 | 24447070 ~ 24447200 (+) | True | LOC113530228 |
| trnat-cgu_4 | other | downstream | 2394224 | 24660606 ~ 24660677 (+) | True | trnat-cgu_4 |
