RNA id: XM_026919690.2


Basic Information

Item Value
RNA id XM_026919690.2
length 1590
RNA type mRNA
GC content 0.46
exon number 14
gene id anxa2a
representative True

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 16540852 ~ 16546270 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

TCTTGAATACACTTTATGGGTGATTGGCATTTTTTCAACATAAGCACGGTGGTGTTTTTCCTGCTGTGCACTGGAGGAGGAGGCATTACTGCACTGAAGGGAGGGAACAACTCCTGGCAGAGGCTGTGGTATTTAACCACCACACCCTTTTCACTTCTCATAGCTGGAACTCTTCTGTGCATCATCTGCTCACTTAGGACATCTAAGATGGCTTTGGTATCTGAATTCCTGGGTCAGCTGACCCTCAATTTTGGGTCGAGCGATCCCACCTACCCCACTGTGGTTCCTGCAGCTGATTTTGATCCAGACAAAGATGCCACCAGAATAGAGACAGCTATCAAAACTAAAGGTGTGGATGAACAGACCATTATTCAGATCCTCACCAAACGGACATACAGCCAAAGACGAGAAATTGCCTTTGCATATGAGAGGAGAGCCAAGAAGGATATGATTACTGCCCTGAAGGGGGCACTGTCTGGCTCACTCGAGACTGTTATTTTGGGCCTGATGAAGAGCACTGCTCAGTACGATGCCTCTGAGATTAAAGCCTCCATAAAAGGTTTAGGAACAGATGAGGAGACCCTGATTGAGATCCTCTGCTCTCGAAGCAATGCAGAGCTGGTGGAGATTAAGAAAGTCTACAAAGAACtgttCAAAAAGGACCTGGAGAAGGATGTGGCTGGAGACACCTCAGGAGACTTCGCTAAGCTGCTGCTCGCCCTAGTGGCGGCCAAGCGGGATGAGCCAAGCACTGTAGTTGACTATGGGAAAATTGATGAAGATGCCAGAGCACTGTATGAAGCTGGAGTGAAACGGAAGGGCACTGATGTCAAAACCTGGATTAGCATCATGTCAGAGAGGAGTGTCCCTCATCTGCAGAAAGTATTTGACAGATACAAGAGCTACAGTCCCTATGACATGCAGGAGAGCATCAGGAAGGAAGTAAAAGGAGATCTGGAGATGTCCTTCCTTACACTCGTCCAGTGCTTTGAAAACAAACAGCTCTACTTTGCCAGCAGACTCAACGATGCCATGAAGagTAAAGGCGCAAAGGAGAAAGTGGTGACGAGGATCATGATCTCACGCTGTGAGGTTGACCTTAAGAAGATCAGGTCTGAGTTCAAGGCCCAGTTTGGAAAGTCTCTGTACCAGACCCTCTCTGAGCACACTAAAGGAGACTATCAGCAGGCTCTGCTAAGTTTGTGTGGAGGAGATGATTAAAGCAGAGCAGGTAACTGGTTCCAGGACCCTCAGATGCTGTGATCCTCAGGAGCCTTTCGTCTGCTCAGCCCTCGGCTCTCACGTACTGTTCTAGCTTTATGGATAGTCTATAATCTATATGGATCAGTCTATCTCTAACTGGAGTCACAGTGTTTCAAAGAGACCAAAGACAAAAATCCCAATTATGTCATTTGTAGGCTTCTGAAGTAATgactgttgaatgctcaaatctggGGTTGGTAAGCTCAACTGATTGAGTTACATTATCCACAAAGAAGGCAAATGTATTTCTGCATCCCATAAATAAAGGGACAACGCTGTATTAAACTGTGCCATAGTTGACCAttctaatgcttttttttttttttt

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function
GO:0004859 phospholipase inhibitor activity molecular_function
GO:0008092 cytoskeletal protein binding molecular_function

KEGG:

id description
K17092 ANXA2; annexin A2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU177511 lncRNA downstream 42391 16496171 ~ 16498461 (-) True G149841
TU177505 lncRNA downstream 79807 16460791 ~ 16461045 (-) True G149836
TU177366 lncRNA downstream 116248 16422666 ~ 16424604 (-) True G149718
TU177254 lncRNA downstream 222926 16309890 ~ 16317926 (-) True G149632
TU177277 lncRNA downstream 285366 16254647 ~ 16255486 (-) True G149649
TU177528 lncRNA upstream 66714 16612984 ~ 16614416 (-) True G149854
TU177779 lncRNA upstream 472686 17018956 ~ 17019183 (-) True G150089
TU177718 lncRNA upstream 481847 17028117 ~ 17042478 (-) True G150036
TU177721 lncRNA upstream 481847 17028117 ~ 17052512 (-) False G150036
TU177720 lncRNA upstream 484286 17030556 ~ 17042478 (-) False G150036
XM_026918976.2 mRNA downstream 82457 16443455 ~ 16458395 (-) False bnip2
XM_026918977.2 mRNA downstream 82457 16443455 ~ 16458395 (-) False bnip2
XM_026918974.2 mRNA downstream 82457 16443455 ~ 16458395 (-) False bnip2
XM_034307284.1 mRNA downstream 82457 16443455 ~ 16458395 (-) True bnip2
XM_026919384.2 mRNA downstream 178477 16325942 ~ 16362375 (-) True otud7a
XM_026919801.2 mRNA upstream 1055 16547325 ~ 16566002 (-) True ice2
XM_034307590.1 mRNA upstream 1055 16547325 ~ 16562803 (-) False ice2
XM_034307591.1 mRNA upstream 1055 16547325 ~ 16562788 (-) False ice2
XM_026918892.2 mRNA upstream 21025 16567295 ~ 16800368 (-) True roraa
XM_026918893.2 mRNA upstream 21025 16567295 ~ 16630301 (-) False roraa
XR_004578830.1 other downstream 548758 15990080 ~ 15992094 (-) False islr2
XR_004578773.1 other downstream 1312820 15220972 ~ 15228032 (-) False LOC113529695
TU176301 other downstream 1452836 15086123 ~ 15088016 (-) False dynlrb2
TU176092 other downstream 1728147 14810004 ~ 14812705 (-) True G148647
TU175596 other downstream 2707963 13825897 ~ 13832889 (-) False LOC113529512
XR_003403120.2 other upstream 206906 16753176 ~ 16753281 (-) True LOC113530224
TU177725 other upstream 507096 17053366 ~ 17058906 (-) True LOC113529460
XR_003403060.1 other upstream 1208114 17754384 ~ 17760039 (-) True LOC113529452
XR_003403059.2 other upstream 1659883 18206153 ~ 18214487 (-) False fnbp4
XR_003403119.2 other upstream 1758368 18304638 ~ 18304801 (-) True LOC113530223

Expression Profile