Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026919734.2 |
| length | 1153 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 6 |
| gene id | pdcd2l |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 13465273 ~ 13470743 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K14801 | TSR4; pre-rRNA-processing protein TSR4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU175134 | lncRNA | upstream | 17472 | 13447435 ~ 13447801 (+) | True | G147821 |
| TU175092 | lncRNA | upstream | 18882 | 13443129 ~ 13446391 (+) | True | G147788 |
| TU175130 | lncRNA | upstream | 27892 | 13437114 ~ 13437381 (+) | True | G147817 |
| TU175077 | lncRNA | upstream | 28364 | 13436190 ~ 13436909 (+) | False | G147785 |
| TU175095 | lncRNA | upstream | 32689 | 13413492 ~ 13432584 (+) | True | G147791 |
| TU175308 | lncRNA | downstream | 277504 | 13748247 ~ 13750306 (+) | True | G147977 |
| TU175318 | lncRNA | downstream | 320413 | 13791156 ~ 13829331 (+) | False | fanci |
| TU175712 | lncRNA | downstream | 583719 | 14054462 ~ 14056322 (+) | True | G148321 |
| TU175720 | lncRNA | downstream | 613591 | 14084334 ~ 14084563 (+) | True | G148326 |
| TU175721 | lncRNA | downstream | 614476 | 14085219 ~ 14085421 (+) | True | G148327 |
| XM_026919136.2 | mRNA | upstream | 84021 | 13372902 ~ 13381252 (+) | True | prr33 |
| XM_026919512.2 | mRNA | upstream | 107119 | 13356233 ~ 13358154 (+) | True | myod1 |
| XM_026918818.2 | mRNA | upstream | 112011 | 13349323 ~ 13353262 (+) | True | zgc:172145 |
| XM_026919076.2 | mRNA | upstream | 249282 | 13189684 ~ 13215991 (+) | False | mob2a |
| XM_034307428.1 | mRNA | downstream | 2441 | 13473184 ~ 13522795 (+) | False | banp |
| XM_026919960.2 | mRNA | downstream | 2457 | 13473200 ~ 13522795 (+) | True | banp |
| XM_026919961.2 | mRNA | downstream | 2458 | 13473201 ~ 13522795 (+) | False | banp |
| XM_026918607.2 | mRNA | downstream | 52879 | 13523622 ~ 13712474 (+) | True | LOC113529436 |
| XM_034307427.1 | mRNA | downstream | 52879 | 13523622 ~ 13712474 (+) | False | LOC113529436 |
| TU175114 | other | upstream | 112020 | 13349326 ~ 13353253 (+) | False | zgc:172145 |
| TU174750 | other | upstream | 548019 | 12916919 ~ 12917254 (+) | True | G147542 |
| XR_004578672.1 | other | upstream | 2158955 | 11295128 ~ 11306318 (+) | False | hrh2a |
| XR_003403100.2 | other | upstream | 2161327 | 11295128 ~ 11303946 (+) | False | hrh2a |
| TU173183 | other | upstream | 2917481 | 10543875 ~ 10547792 (+) | False | si:ch73-233f7.1 |
| XR_003403080.2 | other | downstream | 290591 | 13761334 ~ 13775183 (+) | False | ces2b |
| trnar-ucg_5 | other | downstream | 349847 | 13820590 ~ 13820662 (+) | True | trnar-ucg_5 |
| XR_004578669.1 | other | downstream | 2337247 | 15807990 ~ 15822591 (+) | False | LOC113529564 |
| XR_004578670.1 | other | downstream | 2337247 | 15807990 ~ 15820156 (+) | False | LOC113529564 |
| XR_003403067.2 | other | downstream | 2337247 | 15807990 ~ 15819573 (+) | False | LOC113529564 |
