Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578830.1 |
| length | 1171 |
| RNA type | misc_RNA |
| GC content | 0.38 |
| exon number | 2 |
| gene id | islr2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 15981164 ~ 15992094 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU176932 | lncRNA | downstream | 86178 | 15903692 ~ 15903902 (-) | True | G149366 |
| TU176930 | lncRNA | downstream | 87438 | 15902440 ~ 15902642 (-) | True | G149364 |
| TU176929 | lncRNA | downstream | 91919 | 15897890 ~ 15898161 (-) | True | G149363 |
| TU176874 | lncRNA | downstream | 231579 | 15758284 ~ 15758501 (-) | True | G149312 |
| TU176867 | lncRNA | downstream | 237610 | 15751159 ~ 15752470 (-) | True | G149305 |
| XR_004578675.1 | lncRNA | upstream | 76335 | 16068429 ~ 16092930 (-) | False | LOC113529609 |
| XR_003403074.2 | lncRNA | upstream | 76335 | 16068429 ~ 16092930 (-) | True | LOC113529609 |
| TU177091 | lncRNA | upstream | 100978 | 16093072 ~ 16095175 (-) | True | G149495 |
| TU177243 | lncRNA | upstream | 149025 | 16141119 ~ 16219622 (-) | False | acsbg1 |
| TU177253 | lncRNA | upstream | 188812 | 16180906 ~ 16238108 (-) | True | G149631 |
| XM_026920000.2 | mRNA | downstream | 5060 | 15981164 ~ 15985020 (-) | True | islr2 |
| XM_034307716.1 | mRNA | downstream | 53502 | 15904320 ~ 15936578 (-) | False | ccdc33 |
| XM_034307717.1 | mRNA | downstream | 54555 | 15904320 ~ 15935525 (-) | False | ccdc33 |
| XM_034307718.1 | mRNA | downstream | 57249 | 15904320 ~ 15932831 (-) | False | ccdc33 |
| XM_026919884.2 | mRNA | downstream | 57608 | 15904320 ~ 15932472 (-) | False | ccdc33 |
| XM_026919790.2 | mRNA | upstream | 5795 | 15997889 ~ 16005363 (-) | True | sema7a |
| XM_026920064.2 | mRNA | upstream | 22826 | 16014920 ~ 16024858 (-) | True | man2c1 |
| XM_026918767.2 | mRNA | upstream | 36061 | 16028155 ~ 16043550 (-) | False | ca12 |
| XM_026918769.2 | mRNA | upstream | 36061 | 16028155 ~ 16043548 (-) | False | ca12 |
| XM_034307143.1 | mRNA | upstream | 40817 | 16032911 ~ 16043852 (-) | False | ca12 |
| XR_004578773.1 | other | downstream | 762048 | 15220972 ~ 15228032 (-) | False | LOC113529695 |
| TU176301 | other | downstream | 902064 | 15086123 ~ 15088016 (-) | False | dynlrb2 |
| TU176092 | other | downstream | 1177375 | 14810004 ~ 14812705 (-) | True | G148647 |
| TU175596 | other | downstream | 2157191 | 13825897 ~ 13832889 (-) | False | LOC113529512 |
| trnar-acg_1 | other | downstream | 2199535 | 13790473 ~ 13790545 (-) | False | trnar-acg_1 |
| XR_003403120.2 | other | upstream | 761082 | 16753176 ~ 16753281 (-) | True | LOC113530224 |
| TU177725 | other | upstream | 1061272 | 17053366 ~ 17058906 (-) | True | LOC113529460 |
| XR_003403060.1 | other | upstream | 1762290 | 17754384 ~ 17760039 (-) | True | LOC113529452 |
| XR_003403059.2 | other | upstream | 2214059 | 18206153 ~ 18214487 (-) | False | fnbp4 |
| XR_003403119.2 | other | upstream | 2312544 | 18304638 ~ 18304801 (-) | True | LOC113530223 |
