Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403060.1 |
| length | 101 |
| RNA type | ncRNA |
| GC content | 0.49 |
| exon number | 3 |
| gene id | LOC113529452 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 17754384 ~ 17760039 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU178258 | lncRNA | downstream | 55300 | 17698687 ~ 17699084 (-) | True | G150495 |
| TU178231 | lncRNA | downstream | 98595 | 17655589 ~ 17655789 (-) | True | G150469 |
| TU178225 | lncRNA | downstream | 102504 | 17651673 ~ 17651880 (-) | True | G150463 |
| TU178221 | lncRNA | downstream | 107439 | 17646733 ~ 17646945 (-) | True | G150459 |
| TU178186 | lncRNA | downstream | 155190 | 17598788 ~ 17599194 (-) | True | G150424 |
| TU178426 | lncRNA | upstream | 152601 | 17912640 ~ 17912855 (-) | True | G150631 |
| TU178583 | lncRNA | upstream | 352213 | 18112252 ~ 18112477 (-) | True | G150776 |
| TU178625 | lncRNA | upstream | 444614 | 18204653 ~ 18205316 (-) | False | fnbp4 |
| TU178654 | lncRNA | upstream | 495036 | 18255075 ~ 18255418 (-) | True | G150834 |
| TU178674 | lncRNA | upstream | 541254 | 18301293 ~ 18302959 (-) | True | G150854 |
| XM_026919746.2 | mRNA | downstream | 193561 | 17554092 ~ 17560823 (-) | True | dldh |
| XM_026920032.2 | mRNA | downstream | 299306 | 17448608 ~ 17455078 (-) | True | parp16 |
| XM_026918716.2 | mRNA | downstream | 319947 | 17424907 ~ 17434437 (-) | True | apba2a |
| XM_026919068.2 | mRNA | downstream | 334181 | 17405410 ~ 17420203 (-) | True | duox |
| XM_026919754.2 | mRNA | downstream | 365443 | 17323198 ~ 17388941 (-) | True | tjp1b |
| XM_034307196.1 | mRNA | upstream | 67441 | 17827480 ~ 17831769 (-) | False | LOC113530008 |
| XM_026919669.2 | mRNA | upstream | 67441 | 17827480 ~ 17831769 (-) | False | LOC113530008 |
| XM_026919671.2 | mRNA | upstream | 67441 | 17827480 ~ 17831670 (-) | True | LOC113530008 |
| XM_034307536.1 | mRNA | upstream | 73074 | 17833113 ~ 17835443 (-) | True | LOC117598082 |
| XM_034307083.1 | mRNA | upstream | 80073 | 17840112 ~ 17842564 (-) | True | LOC117597889 |
| TU177725 | other | downstream | 695478 | 17053366 ~ 17058906 (-) | True | LOC113529460 |
| XR_003403120.2 | other | downstream | 1001103 | 16753176 ~ 16753281 (-) | True | LOC113530224 |
| XR_004578830.1 | other | downstream | 1762290 | 15990080 ~ 15992094 (-) | False | islr2 |
| XR_004578773.1 | other | downstream | 2526352 | 15220972 ~ 15228032 (-) | False | LOC113529695 |
| TU176301 | other | downstream | 2666368 | 15086123 ~ 15088016 (-) | False | dynlrb2 |
| XR_003403059.2 | other | upstream | 446114 | 18206153 ~ 18214487 (-) | False | fnbp4 |
| XR_003403119.2 | other | upstream | 544599 | 18304638 ~ 18304801 (-) | True | LOC113530223 |
| XR_004578649.1 | other | upstream | 594960 | 18354999 ~ 18364036 (-) | False | parp6b |
| TU178843 | other | upstream | 665280 | 18425319 ~ 18428973 (-) | True | G150991 |
| trnat-agu_10 | other | upstream | 1382204 | 19142243 ~ 19142316 (-) | True | trnat-agu_10 |
