Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU340601 |
| length | 798 |
| RNA type | TUCP |
| GC content | 0.55 |
| exon number | 3 |
| gene id | G287625 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 806306 ~ 897362 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU340609 | lncRNA | upstream | 3782 | 762431 ~ 802524 (+) | True | G287627 |
| XR_004580133.1 | lncRNA | upstream | 337902 | 454598 ~ 468404 (+) | True | LOC113525268 |
| XR_004580129.1 | lncRNA | upstream | 415104 | 388696 ~ 391202 (+) | False | LOC117599767 |
| XR_004580134.1 | lncRNA | downstream | 106686 | 926233 ~ 926639 (+) | True | LOC117599769 |
| TU340884 | lncRNA | downstream | 170663 | 990210 ~ 990435 (+) | True | G287814 |
| TU340887 | lncRNA | downstream | 186120 | 1005667 ~ 1007006 (+) | True | G287817 |
| TU340963 | lncRNA | downstream | 364536 | 1184083 ~ 1184363 (+) | True | G287872 |
| TU340985 | lncRNA | downstream | 422314 | 1241861 ~ 1242067 (+) | True | G287891 |
| XM_034313888.1 | mRNA | upstream | 288862 | 511056 ~ 517444 (+) | True | LOC117599791 |
| XM_034313772.1 | mRNA | upstream | 400360 | 405152 ~ 405946 (+) | True | LOC117599754 |
| XM_034313883.1 | mRNA | upstream | 596122 | 203020 ~ 210184 (+) | True | LOC117599788 |
| XM_026910051.2 | mRNA | upstream | 672042 | 120176 ~ 134264 (+) | True | LOC113523954 |
| XM_034313880.1 | mRNA | upstream | 704327 | 85203 ~ 101979 (+) | True | LOC117599786 |
| XM_034313773.1 | mRNA | downstream | 5130 | 824677 ~ 826163 (+) | True | LOC117599755 |
| XM_034313778.1 | mRNA | downstream | 11873 | 831420 ~ 831846 (+) | True | LOC117599761 |
| XM_034313776.1 | mRNA | downstream | 12813 | 832360 ~ 832825 (+) | True | LOC117599758 |
| XM_026911740.2 | mRNA | downstream | 40120 | 859667 ~ 861490 (+) | True | LOC113525267 |
| XM_034313780.1 | mRNA | downstream | 77453 | 897000 ~ 897286 (+) | True | LOC117599763 |
| TU340986 | other | downstream | 423510 | 1243057 ~ 1243672 (+) | True | G287892 |
| XR_004580082.1 | other | downstream | 439629 | 1259176 ~ 1264632 (+) | False | LOC117599677 |
| TU341023 | other | downstream | 538639 | 1358186 ~ 1359362 (+) | False | srp9 |
| TU341376 | other | downstream | 1177250 | 1996797 ~ 2008806 (+) | False | ptchd4 |
| XR_004580079.1 | other | downstream | 1313611 | 2133158 ~ 2141637 (+) | False | LOC113546780 |
