Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU344666 |
| length | 853 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G290935 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 6713927 ~ 6727514 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU344600 | lncRNA | upstream | 290961 | 6422672 ~ 6422966 (+) | True | G290879 |
| TU344584 | lncRNA | upstream | 371387 | 6342263 ~ 6342540 (+) | True | G290863 |
| TU344375 | lncRNA | upstream | 476011 | 6237714 ~ 6237916 (+) | True | G290699 |
| TU344338 | lncRNA | upstream | 553887 | 6135952 ~ 6160040 (+) | False | b4galt6 |
| XR_004580161.1 | lncRNA | upstream | 894861 | 5815902 ~ 5819066 (+) | False | LOC117599801 |
| TU344782 | lncRNA | downstream | 106893 | 6834407 ~ 6834698 (+) | True | G291037 |
| XR_004580109.1 | lncRNA | downstream | 202855 | 6930369 ~ 6933860 (+) | False | LOC117599731 |
| XR_004580108.1 | lncRNA | downstream | 202861 | 6930375 ~ 6933860 (+) | False | LOC117599731 |
| XR_004580107.1 | lncRNA | downstream | 202864 | 6930378 ~ 6933860 (+) | True | LOC117599731 |
| TU344819 | lncRNA | downstream | 211677 | 6939191 ~ 6939619 (+) | True | G291058 |
| XM_034313819.1 | mRNA | upstream | 14110 | 6691634 ~ 6699817 (+) | False | LOC113545329 |
| XM_026944644.2 | mRNA | upstream | 14110 | 6691636 ~ 6699817 (+) | True | LOC113545329 |
| XM_026944412.2 | mRNA | upstream | 37573 | 6661880 ~ 6676354 (+) | True | taf4b |
| XM_026944352.2 | mRNA | upstream | 53343 | 6640967 ~ 6660584 (+) | False | kctd1 |
| XM_026944351.2 | mRNA | upstream | 53343 | 6649383 ~ 6660584 (+) | True | kctd1 |
| XM_026944379.2 | mRNA | downstream | 69825 | 6797339 ~ 6807341 (+) | True | si:dkeyp-72h1.1 |
| XM_026944567.2 | mRNA | downstream | 105872 | 6833386 ~ 6848533 (+) | True | tnfaip2a |
| XM_026944427.2 | mRNA | downstream | 122842 | 6850356 ~ 6868031 (+) | True | LOC113545215 |
| XM_026944472.2 | mRNA | downstream | 156789 | 6884303 ~ 6893353 (+) | True | eif5 |
| XM_026944596.2 | mRNA | downstream | 178007 | 6905521 ~ 6911188 (+) | False | fam167ab |
| XR_004580141.1 | other | upstream | 912234 | 5735473 ~ 5801693 (+) | True | usp24 |
| XR_004580098.1 | other | upstream | 1734527 | 4941951 ~ 4979400 (+) | False | dnm3a |
| XR_004580167.1 | other | downstream | 285228 | 7012742 ~ 7019686 (+) | False | tdh |
| trnac-gca_25 | other | downstream | 861854 | 7589368 ~ 7589439 (+) | True | trnac-gca_25 |
| trnaa-cgc_5 | other | downstream | 1155704 | 7883218 ~ 7883289 (+) | True | trnaa-cgc_5 |
| trnaa-cgc_6 | other | downstream | 1157131 | 7884645 ~ 7884716 (+) | True | trnaa-cgc_6 |
| trnaa-ugc_17 | other | downstream | 1160014 | 7887528 ~ 7887599 (+) | True | trnaa-ugc_17 |
