Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU345070 |
| length | 943 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G291274 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 7220306 ~ 7227227 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU344873 | lncRNA | upstream | 161723 | 7058383 ~ 7058583 (+) | True | G291109 |
| TU344857 | lncRNA | upstream | 237502 | 6981963 ~ 6982804 (+) | True | G291096 |
| TU344819 | lncRNA | upstream | 280687 | 6939191 ~ 6939619 (+) | True | G291058 |
| XR_004580109.1 | lncRNA | upstream | 286446 | 6930369 ~ 6933860 (+) | False | LOC117599731 |
| TU345097 | lncRNA | downstream | 33823 | 7261050 ~ 7262111 (+) | True | G291300 |
| TU345188 | lncRNA | downstream | 177201 | 7404428 ~ 7405105 (+) | True | G291380 |
| TU345235 | lncRNA | downstream | 262081 | 7489308 ~ 7520858 (+) | True | G291423 |
| TU345246 | lncRNA | downstream | 294697 | 7521924 ~ 7522123 (+) | True | G291434 |
| XR_003404600.2 | lncRNA | downstream | 383260 | 7610487 ~ 7614980 (+) | True | LOC113545343 |
| XM_026944342.2 | mRNA | upstream | 650 | 7208687 ~ 7219656 (+) | True | znf513a |
| XM_026944600.2 | mRNA | upstream | 73172 | 7118691 ~ 7147134 (+) | True | fndc4a |
| XM_034313491.1 | mRNA | upstream | 73172 | 7118691 ~ 7147134 (+) | False | fndc4a |
| XM_034313492.1 | mRNA | upstream | 73172 | 7119316 ~ 7147134 (+) | False | fndc4a |
| XM_026944570.2 | mRNA | upstream | 114290 | 7096141 ~ 7106016 (+) | True | blk |
| XM_026944335.2 | mRNA | downstream | 18945 | 7246172 ~ 7249822 (+) | True | atraid |
| XM_034313432.1 | mRNA | downstream | 36699 | 7263926 ~ 7276146 (+) | False | nme6 |
| XM_034313431.1 | mRNA | downstream | 40179 | 7267406 ~ 7276146 (+) | True | nme6 |
| XM_026944356.2 | mRNA | downstream | 40179 | 7267406 ~ 7276146 (+) | False | nme6 |
| XM_026944605.2 | mRNA | downstream | 111852 | 7339079 ~ 7344915 (+) | True | si:ch211-142k18.1 |
| XR_004580167.1 | other | upstream | 200620 | 7012742 ~ 7019686 (+) | False | tdh |
| XR_004580141.1 | other | upstream | 1418613 | 5735473 ~ 5801693 (+) | True | usp24 |
| XR_004580099.1 | other | upstream | 2240906 | 4941952 ~ 4979400 (+) | False | dnm3a |
| XR_004580101.1 | other | upstream | 2241451 | 4941951 ~ 4978855 (+) | False | dnm3a |
| trnac-gca_25 | other | downstream | 362141 | 7589368 ~ 7589439 (+) | True | trnac-gca_25 |
| trnaa-cgc_5 | other | downstream | 655991 | 7883218 ~ 7883289 (+) | True | trnaa-cgc_5 |
| trnaa-cgc_6 | other | downstream | 657418 | 7884645 ~ 7884716 (+) | True | trnaa-cgc_6 |
| trnaa-ugc_17 | other | downstream | 660301 | 7887528 ~ 7887599 (+) | True | trnaa-ugc_17 |
| trnaa-ugc_18 | other | downstream | 660782 | 7888009 ~ 7888080 (+) | True | trnaa-ugc_18 |
