Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404603.2 |
| length | 426 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 4 |
| gene id | LOC113545369 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 8488647 ~ 8534500 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU345955 | lncRNA | upstream | 15241 | 8470947 ~ 8473728 (+) | True | G291976 |
| TU345951 | lncRNA | upstream | 23932 | 8464837 ~ 8465037 (+) | True | G291972 |
| TU345853 | lncRNA | upstream | 167510 | 8309242 ~ 8321459 (+) | True | G291907 |
| TU345697 | lncRNA | upstream | 361071 | 8126021 ~ 8127898 (+) | True | G291769 |
| XR_004580121.1 | lncRNA | upstream | 540938 | 7945952 ~ 7948031 (+) | True | LOC117599748 |
| TU346061 | lncRNA | downstream | 48450 | 8582950 ~ 8583477 (+) | True | G292072 |
| TU346063 | lncRNA | downstream | 49719 | 8584219 ~ 8585902 (+) | True | G292074 |
| TU346095 | lncRNA | downstream | 170554 | 8705054 ~ 8705244 (+) | True | G292102 |
| TU346720 | lncRNA | downstream | 873992 | 9408492 ~ 9408714 (+) | True | G292654 |
| TU346709 | lncRNA | downstream | 880051 | 9414551 ~ 9415576 (+) | True | G292643 |
| XM_026944480.2 | mRNA | upstream | 29241 | 8446316 ~ 8459728 (+) | True | clic5b |
| XM_034313589.1 | mRNA | upstream | 183370 | 8296614 ~ 8305599 (+) | False | LOC113545195 |
| XM_034313590.1 | mRNA | upstream | 183370 | 8296614 ~ 8305599 (+) | False | LOC113545195 |
| XM_026944397.2 | mRNA | upstream | 188230 | 8296614 ~ 8300739 (+) | True | LOC113545195 |
| XM_026944386.2 | mRNA | upstream | 298388 | 8175511 ~ 8190581 (+) | False | esr2a |
| XM_026944651.2 | mRNA | downstream | 15442 | 8549942 ~ 8557745 (+) | True | LOC113545337 |
| XM_026944368.2 | mRNA | downstream | 65911 | 8600411 ~ 8605983 (+) | False | wdcp |
| XM_026944369.2 | mRNA | downstream | 66125 | 8600625 ~ 8605983 (+) | True | wdcp |
| XM_026944500.2 | mRNA | downstream | 101950 | 8636450 ~ 8704985 (+) | True | atad2b |
| XM_034313707.1 | mRNA | downstream | 101950 | 8636450 ~ 8701451 (+) | False | atad2b |
| TU345691 | other | upstream | 414532 | 8043399 ~ 8074437 (+) | False | nudt14 |
| trnaa-cgc_7 | other | upstream | 600133 | 7888765 ~ 7888836 (+) | True | trnaa-cgc_7 |
| trnaa-ugc_18 | other | upstream | 600889 | 7888009 ~ 7888080 (+) | True | trnaa-ugc_18 |
| trnaa-ugc_17 | other | upstream | 601370 | 7887528 ~ 7887599 (+) | True | trnaa-ugc_17 |
| trnaa-cgc_6 | other | upstream | 604253 | 7884645 ~ 7884716 (+) | True | trnaa-cgc_6 |
| trnak-uuu_18 | other | downstream | 357168 | 8891668 ~ 8891740 (+) | True | trnak-uuu_18 |
| TU346212 | other | downstream | 459013 | 8993513 ~ 8996996 (+) | True | G292216 |
| XR_004580138.1 | other | downstream | 539528 | 9074028 ~ 9160901 (+) | False | LOC113545247 |
| TU347160 | other | downstream | 1369250 | 9903750 ~ 9950731 (+) | True | G293016 |
| TU347333 | other | downstream | 1624455 | 10158955 ~ 10161751 (+) | False | LOC117599798 |
