Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU346212 |
| length | 583 |
| RNA type | TUCP |
| GC content | 0.52 |
| exon number | 3 |
| gene id | G292216 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 8993513 ~ 8996996 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU346095 | lncRNA | upstream | 288269 | 8705054 ~ 8705244 (+) | True | G292102 |
| TU346063 | lncRNA | upstream | 407611 | 8584219 ~ 8585902 (+) | True | G292074 |
| TU346061 | lncRNA | upstream | 410036 | 8582950 ~ 8583477 (+) | True | G292072 |
| XR_003404603.2 | lncRNA | upstream | 459013 | 8488969 ~ 8534500 (+) | False | LOC113545369 |
| TU346720 | lncRNA | downstream | 411496 | 9408492 ~ 9408714 (+) | True | G292654 |
| TU346709 | lncRNA | downstream | 417555 | 9414551 ~ 9415576 (+) | True | G292643 |
| TU346871 | lncRNA | downstream | 557441 | 9554437 ~ 9554807 (+) | True | G292765 |
| TU346877 | lncRNA | downstream | 590704 | 9587700 ~ 9587903 (+) | True | G292771 |
| TU346862 | lncRNA | downstream | 614992 | 9611988 ~ 9612612 (+) | True | G292756 |
| XM_026944403.2 | mRNA | upstream | 2984 | 8987232 ~ 8990529 (+) | True | chgb |
| XM_026944503.2 | mRNA | upstream | 46512 | 8940392 ~ 8947001 (+) | True | gzf1 |
| XM_026944500.2 | mRNA | upstream | 288528 | 8636450 ~ 8704985 (+) | True | atad2b |
| XM_034313707.1 | mRNA | upstream | 292062 | 8636450 ~ 8701451 (+) | False | atad2b |
| XM_026944368.2 | mRNA | upstream | 387530 | 8600411 ~ 8605983 (+) | False | wdcp |
| XM_026944361.2 | mRNA | downstream | 40115 | 9037111 ~ 9041907 (+) | True | bmp2b |
| XM_034313446.1 | mRNA | downstream | 40115 | 9037111 ~ 9041907 (+) | False | bmp2b |
| XM_034313447.1 | mRNA | downstream | 40115 | 9037111 ~ 9041907 (+) | False | bmp2b |
| XM_026944484.2 | mRNA | downstream | 77032 | 9074028 ~ 9179173 (+) | True | LOC113545247 |
| XM_026944485.2 | mRNA | downstream | 77032 | 9074028 ~ 9179173 (+) | False | LOC113545247 |
| trnak-uuu_18 | other | upstream | 101773 | 8891668 ~ 8891740 (+) | True | trnak-uuu_18 |
| TU345969 | other | upstream | 484030 | 8488647 ~ 8509483 (+) | False | LOC113545369 |
| TU345691 | other | upstream | 919076 | 8043399 ~ 8074437 (+) | False | nudt14 |
| trnaa-cgc_7 | other | upstream | 1104677 | 7888765 ~ 7888836 (+) | True | trnaa-cgc_7 |
| trnaa-ugc_18 | other | upstream | 1105433 | 7888009 ~ 7888080 (+) | True | trnaa-ugc_18 |
| XR_004580138.1 | other | downstream | 77032 | 9074028 ~ 9160901 (+) | False | LOC113545247 |
| TU347160 | other | downstream | 906754 | 9903750 ~ 9950731 (+) | True | G293016 |
| TU347333 | other | downstream | 1161959 | 10158955 ~ 10161751 (+) | False | LOC117599798 |
| TU347771 | other | downstream | 2021920 | 11018916 ~ 11024973 (+) | False | G293528 |
| trnai-aau_1 | other | downstream | 2146891 | 11143887 ~ 11143960 (+) | True | trnai-aau_1 |
