Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU346709 |
| length | 1026 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G292643 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 9414551 ~ 9415576 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU346720 | lncRNA | upstream | 5837 | 9408492 ~ 9408714 (+) | True | G292654 |
| TU346095 | lncRNA | upstream | 709307 | 8705054 ~ 8705244 (+) | True | G292102 |
| TU346063 | lncRNA | upstream | 828649 | 8584219 ~ 8585902 (+) | True | G292074 |
| TU346061 | lncRNA | upstream | 831074 | 8582950 ~ 8583477 (+) | True | G292072 |
| XR_003404603.2 | lncRNA | upstream | 880051 | 8488969 ~ 8534500 (+) | False | LOC113545369 |
| TU346871 | lncRNA | downstream | 138861 | 9554437 ~ 9554807 (+) | True | G292765 |
| TU346877 | lncRNA | downstream | 172124 | 9587700 ~ 9587903 (+) | True | G292771 |
| TU346862 | lncRNA | downstream | 196412 | 9611988 ~ 9612612 (+) | True | G292756 |
| TU346860 | lncRNA | downstream | 197849 | 9613425 ~ 9616591 (+) | True | G292754 |
| TU347065 | lncRNA | downstream | 452573 | 9868149 ~ 9868609 (+) | True | G292929 |
| XM_034313813.1 | mRNA | upstream | 2316 | 9389746 ~ 9412235 (+) | False | LOC113545286 |
| XM_026944560.2 | mRNA | upstream | 2316 | 9398808 ~ 9412235 (+) | True | LOC113545286 |
| XM_026944406.2 | mRNA | upstream | 28756 | 9384881 ~ 9385795 (+) | True | LOC113545203 |
| XM_026944404.2 | mRNA | upstream | 76191 | 9336792 ~ 9338360 (+) | True | LOC113545201 |
| XM_026944364.2 | mRNA | upstream | 149700 | 9258394 ~ 9264851 (+) | True | lamp5 |
| XM_026944652.2 | mRNA | downstream | 3534 | 9419110 ~ 9424569 (+) | True | LOC113545338 |
| XM_026944653.2 | mRNA | downstream | 3534 | 9419110 ~ 9424569 (+) | False | LOC113545338 |
| XM_026944654.2 | mRNA | downstream | 3534 | 9419110 ~ 9424212 (+) | False | LOC113545338 |
| XM_026944656.2 | mRNA | downstream | 3534 | 9419110 ~ 9424212 (+) | False | LOC113545338 |
| XM_026944432.2 | mRNA | downstream | 10869 | 9426445 ~ 9463533 (+) | False | evlb |
| XR_004580138.1 | other | upstream | 253650 | 9074028 ~ 9160901 (+) | False | LOC113545247 |
| TU346212 | other | upstream | 417555 | 8993513 ~ 8996996 (+) | True | G292216 |
| trnak-uuu_18 | other | upstream | 522811 | 8891668 ~ 8891740 (+) | True | trnak-uuu_18 |
| TU345969 | other | upstream | 905068 | 8488647 ~ 8509483 (+) | False | LOC113545369 |
| TU345691 | other | upstream | 1340114 | 8043399 ~ 8074437 (+) | False | nudt14 |
| TU347160 | other | downstream | 488174 | 9903750 ~ 9950731 (+) | True | G293016 |
| TU347333 | other | downstream | 743379 | 10158955 ~ 10161751 (+) | False | LOC117599798 |
| TU347771 | other | downstream | 1603340 | 11018916 ~ 11024973 (+) | False | G293528 |
| trnai-aau_1 | other | downstream | 1728311 | 11143887 ~ 11143960 (+) | True | trnai-aau_1 |
| trnai-aau_2 | other | downstream | 1729363 | 11144939 ~ 11145012 (+) | True | trnai-aau_2 |
