Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU347160 |
| length | 479 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G293016 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 9903750 ~ 9950731 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU347065 | lncRNA | upstream | 35141 | 9868149 ~ 9868609 (+) | True | G292929 |
| TU346860 | lncRNA | upstream | 287159 | 9613425 ~ 9616591 (+) | True | G292754 |
| TU346862 | lncRNA | upstream | 291138 | 9611988 ~ 9612612 (+) | True | G292756 |
| TU346877 | lncRNA | upstream | 315847 | 9587700 ~ 9587903 (+) | True | G292771 |
| TU346871 | lncRNA | upstream | 348943 | 9554437 ~ 9554807 (+) | True | G292765 |
| TU347253 | lncRNA | downstream | 85720 | 10036451 ~ 10038355 (+) | True | G293095 |
| TU347278 | lncRNA | downstream | 113034 | 10063765 ~ 10064011 (+) | True | G293110 |
| XR_004580103.1 | lncRNA | downstream | 248118 | 10198849 ~ 10210998 (+) | True | LOC117599717 |
| TU347561 | lncRNA | downstream | 586233 | 10536964 ~ 10537640 (+) | True | G293350 |
| TU347551 | lncRNA | downstream | 601510 | 10552241 ~ 10553007 (+) | True | G293345 |
| XM_026944552.2 | mRNA | upstream | 231222 | 9667681 ~ 9672528 (+) | False | ypel5 |
| XM_026944551.2 | mRNA | upstream | 231222 | 9667692 ~ 9672528 (+) | True | ypel5 |
| XM_026944547.2 | mRNA | upstream | 272641 | 9627578 ~ 9631109 (+) | True | faua |
| XM_026944519.2 | mRNA | upstream | 277640 | 9618836 ~ 9626110 (+) | True | prpf39 |
| XM_026944520.2 | mRNA | upstream | 278900 | 9618830 ~ 9624850 (+) | False | prpf39 |
| XM_026944512.2 | mRNA | downstream | 140638 | 10091369 ~ 10121300 (+) | True | exoc2 |
| XM_026944413.2 | mRNA | downstream | 186258 | 10136989 ~ 10140336 (+) | True | LOC113545207 |
| XM_034313908.1 | mRNA | downstream | 208296 | 10159027 ~ 10170739 (+) | True | LOC117599798 |
| XM_034313648.1 | mRNA | downstream | 220061 | 10170792 ~ 10186608 (+) | False | LOC117599727 |
| XM_034313652.1 | mRNA | downstream | 220061 | 10170792 ~ 10186608 (+) | False | LOC117599727 |
| XR_004580138.1 | other | upstream | 742849 | 9074028 ~ 9160901 (+) | False | LOC113545247 |
| TU346212 | other | upstream | 906754 | 8993513 ~ 8996996 (+) | True | G292216 |
| trnak-uuu_18 | other | upstream | 1012010 | 8891668 ~ 8891740 (+) | True | trnak-uuu_18 |
| TU345969 | other | upstream | 1394267 | 8488647 ~ 8509483 (+) | False | LOC113545369 |
| TU345691 | other | upstream | 1829313 | 8043399 ~ 8074437 (+) | False | nudt14 |
| TU347333 | other | downstream | 208224 | 10158955 ~ 10161751 (+) | False | LOC117599798 |
| TU347771 | other | downstream | 1068185 | 11018916 ~ 11024973 (+) | False | G293528 |
| trnai-aau_1 | other | downstream | 1193156 | 11143887 ~ 11143960 (+) | True | trnai-aau_1 |
| trnai-aau_2 | other | downstream | 1194208 | 11144939 ~ 11145012 (+) | True | trnai-aau_2 |
| trnai-aau_3 | other | downstream | 1195260 | 11145991 ~ 11146064 (+) | True | trnai-aau_3 |
