Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU347561 |
| length | 282 |
| lncRNA type | inter_gene |
| GC content | 0.62 |
| exon number | 2 |
| gene id | G293350 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 10536964 ~ 10537640 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004580103.1 | lncRNA | upstream | 325966 | 10198849 ~ 10210998 (+) | True | LOC117599717 |
| TU347278 | lncRNA | upstream | 472953 | 10063765 ~ 10064011 (+) | True | G293110 |
| TU347253 | lncRNA | upstream | 498609 | 10036451 ~ 10038355 (+) | True | G293095 |
| TU347065 | lncRNA | upstream | 668355 | 9868149 ~ 9868609 (+) | True | G292929 |
| TU346860 | lncRNA | upstream | 920373 | 9613425 ~ 9616591 (+) | True | G292754 |
| TU347551 | lncRNA | downstream | 14601 | 10552241 ~ 10553007 (+) | True | G293345 |
| TU347592 | lncRNA | downstream | 23157 | 10560797 ~ 10561016 (+) | True | G293380 |
| TU347623 | lncRNA | downstream | 71986 | 10609626 ~ 10609846 (+) | True | G293411 |
| TU347646 | lncRNA | downstream | 105860 | 10643500 ~ 10644152 (+) | True | G293427 |
| TU347670 | lncRNA | downstream | 138040 | 10675680 ~ 10677135 (+) | True | G293445 |
| XM_026923730.2 | mRNA | upstream | 9524 | 10503334 ~ 10527440 (+) | True | fmn1 |
| XM_026923731.2 | mRNA | upstream | 10699 | 10503334 ~ 10526265 (+) | False | fmn1 |
| XM_026923090.2 | mRNA | upstream | 124816 | 10383664 ~ 10412148 (+) | True | aven |
| XM_026922696.2 | mRNA | upstream | 158740 | 10374563 ~ 10378224 (+) | True | emc7 |
| XM_026923687.2 | mRNA | upstream | 162963 | 10366168 ~ 10374001 (+) | False | katnbl1 |
| XM_026923072.2 | mRNA | downstream | 72487 | 10610127 ~ 10618262 (+) | True | ywhaqa |
| XM_026922707.2 | mRNA | downstream | 81576 | 10619216 ~ 10636229 (+) | True | adam17b |
| XM_026922934.2 | mRNA | downstream | 111485 | 10649125 ~ 10671634 (+) | True | asap2b |
| XM_034313662.1 | mRNA | downstream | 143685 | 10681325 ~ 10682664 (+) | True | LOC117599733 |
| XM_026923786.2 | mRNA | downstream | 145392 | 10683032 ~ 10718524 (+) | True | mboat2b |
| TU347333 | other | upstream | 375213 | 10158955 ~ 10161751 (+) | False | LOC117599798 |
| TU347160 | other | upstream | 586233 | 9903750 ~ 9950731 (+) | True | G293016 |
| XR_004580138.1 | other | upstream | 1376063 | 9074028 ~ 9160901 (+) | False | LOC113545247 |
| TU346212 | other | upstream | 1539968 | 8993513 ~ 8996996 (+) | True | G292216 |
| trnak-uuu_18 | other | upstream | 1645224 | 8891668 ~ 8891740 (+) | True | trnak-uuu_18 |
| TU347771 | other | downstream | 481276 | 11018916 ~ 11024973 (+) | False | G293528 |
| trnai-aau_1 | other | downstream | 606247 | 11143887 ~ 11143960 (+) | True | trnai-aau_1 |
| trnai-aau_2 | other | downstream | 607299 | 11144939 ~ 11145012 (+) | True | trnai-aau_2 |
| trnai-aau_3 | other | downstream | 608351 | 11145991 ~ 11146064 (+) | True | trnai-aau_3 |
| trnai-aau_4 | other | downstream | 609394 | 11147034 ~ 11147107 (+) | True | trnai-aau_4 |
