Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU347646 |
| length | 304 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G293427 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 10643500 ~ 10644152 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU347623 | lncRNA | upstream | 33654 | 10609626 ~ 10609846 (+) | True | G293411 |
| TU347592 | lncRNA | upstream | 82484 | 10560797 ~ 10561016 (+) | True | G293380 |
| TU347551 | lncRNA | upstream | 90493 | 10552241 ~ 10553007 (+) | True | G293345 |
| TU347561 | lncRNA | upstream | 105860 | 10536964 ~ 10537640 (+) | True | G293350 |
| XR_004580103.1 | lncRNA | upstream | 432502 | 10198849 ~ 10210998 (+) | True | LOC117599717 |
| TU347670 | lncRNA | downstream | 31528 | 10675680 ~ 10677135 (+) | True | G293445 |
| TU347680 | lncRNA | downstream | 37158 | 10681310 ~ 10681571 (+) | False | LOC117599733 |
| TU347766 | lncRNA | downstream | 374254 | 11018406 ~ 11021310 (+) | False | G293528 |
| TU347769 | lncRNA | downstream | 374254 | 11018406 ~ 11024973 (+) | True | G293528 |
| TU347773 | lncRNA | downstream | 374254 | 11018406 ~ 11021310 (+) | False | G293528 |
| XM_026922707.2 | mRNA | upstream | 7271 | 10619216 ~ 10636229 (+) | True | adam17b |
| XM_026923072.2 | mRNA | upstream | 25238 | 10610127 ~ 10618262 (+) | True | ywhaqa |
| XM_026923730.2 | mRNA | upstream | 116060 | 10503334 ~ 10527440 (+) | True | fmn1 |
| XM_026923731.2 | mRNA | upstream | 117235 | 10503334 ~ 10526265 (+) | False | fmn1 |
| XM_026923090.2 | mRNA | upstream | 231352 | 10383664 ~ 10412148 (+) | True | aven |
| XM_026922934.2 | mRNA | downstream | 4973 | 10649125 ~ 10671634 (+) | True | asap2b |
| XM_034313662.1 | mRNA | downstream | 37173 | 10681325 ~ 10682664 (+) | True | LOC117599733 |
| XM_026923786.2 | mRNA | downstream | 38880 | 10683032 ~ 10718524 (+) | True | mboat2b |
| XM_026922795.2 | mRNA | downstream | 78242 | 10722394 ~ 10742331 (+) | True | kidins220b |
| XM_026922798.2 | mRNA | downstream | 78242 | 10722394 ~ 10742331 (+) | False | kidins220b |
| TU347333 | other | upstream | 481749 | 10158955 ~ 10161751 (+) | False | LOC117599798 |
| TU347160 | other | upstream | 692769 | 9903750 ~ 9950731 (+) | True | G293016 |
| XR_004580138.1 | other | upstream | 1482599 | 9074028 ~ 9160901 (+) | False | LOC113545247 |
| TU346212 | other | upstream | 1646504 | 8993513 ~ 8996996 (+) | True | G292216 |
| trnak-uuu_18 | other | upstream | 1751760 | 8891668 ~ 8891740 (+) | True | trnak-uuu_18 |
| TU347771 | other | downstream | 374764 | 11018916 ~ 11024973 (+) | False | G293528 |
| trnai-aau_1 | other | downstream | 499735 | 11143887 ~ 11143960 (+) | True | trnai-aau_1 |
| trnai-aau_2 | other | downstream | 500787 | 11144939 ~ 11145012 (+) | True | trnai-aau_2 |
| trnai-aau_3 | other | downstream | 501839 | 11145991 ~ 11146064 (+) | True | trnai-aau_3 |
| trnai-aau_4 | other | downstream | 502882 | 11147034 ~ 11147107 (+) | True | trnai-aau_4 |
