Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU350104 |
| length | 389 |
| lncRNA type | intronic |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G295597 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047613.1 |
| NCBI id | CM018559.1 |
| chromosome length | 22090854 |
| location | 14259536 ~ 14259990 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU350090 | lncRNA | upstream | 21827 | 14237487 ~ 14237709 (+) | True | G295590 |
| TU349794 | lncRNA | upstream | 240199 | 14017638 ~ 14019337 (+) | True | LOC113532127 |
| TU349801 | lncRNA | upstream | 242910 | 14016393 ~ 14016626 (+) | True | G295333 |
| TU349780 | lncRNA | upstream | 364739 | 13894449 ~ 13894797 (+) | True | G295315 |
| TU349733 | lncRNA | upstream | 531678 | 13727579 ~ 13727858 (+) | True | G295269 |
| TU350095 | lncRNA | downstream | 42671 | 14302661 ~ 14304691 (+) | False | arid1b |
| TU350097 | lncRNA | downstream | 42671 | 14302661 ~ 14303579 (+) | False | arid1b |
| TU350096 | lncRNA | downstream | 42812 | 14302802 ~ 14303579 (+) | False | arid1b |
| TU350207 | lncRNA | downstream | 122556 | 14382546 ~ 14382752 (+) | True | trnas-gcu_11 |
| TU350290 | lncRNA | downstream | 296739 | 14556729 ~ 14574795 (+) | True | G295766 |
| XM_026922756.2 | mRNA | upstream | 28819 | 14221122 ~ 14230717 (+) | True | LOC113531833 |
| XM_034313816.1 | mRNA | upstream | 40107 | 14195317 ~ 14219429 (+) | True | LOC113532133 |
| XM_026922921.2 | mRNA | upstream | 97813 | 14109393 ~ 14161723 (+) | True | LOC113531931 |
| XM_026922922.2 | mRNA | upstream | 152314 | 14105151 ~ 14107222 (+) | True | LOC113531932 |
| XM_034313442.1 | mRNA | upstream | 215842 | 14032442 ~ 14043694 (+) | True | ndufaf7 |
| XM_026923483.2 | mRNA | downstream | 51226 | 14311216 ~ 14342712 (+) | False | zdhhc14 |
| XM_026923482.2 | mRNA | downstream | 51236 | 14311226 ~ 14342712 (+) | False | zdhhc14 |
| XM_034313843.1 | mRNA | downstream | 51256 | 14311246 ~ 14342712 (+) | True | zdhhc14 |
| XM_034313844.1 | mRNA | downstream | 51256 | 14311246 ~ 14342712 (+) | False | zdhhc14 |
| XM_026923305.2 | mRNA | downstream | 97290 | 14357280 ~ 14367279 (+) | True | galca |
| TU349793 | other | upstream | 238852 | 14017638 ~ 14020684 (+) | False | LOC113532127 |
| trnaf-gaa_29 | other | upstream | 704589 | 13554875 ~ 13554947 (+) | True | trnaf-gaa_29 |
| XR_004580084.1 | other | upstream | 713898 | 13468727 ~ 13545638 (+) | False | col12a1b |
| XR_003403290.2 | other | upstream | 2680943 | 11568737 ~ 11578593 (+) | False | pak6b |
| trnai-aau_16 | other | upstream | 3098699 | 11160764 ~ 11160837 (+) | True | trnai-aau_16 |
| trnas-gcu_7 | other | downstream | 118033 | 14378023 ~ 14378104 (+) | True | trnas-gcu_7 |
| trnas-gcu_8 | other | downstream | 118788 | 14378778 ~ 14378859 (+) | True | trnas-gcu_8 |
| trnas-gcu_9 | other | downstream | 120503 | 14380493 ~ 14380574 (+) | True | trnas-gcu_9 |
| trnas-gcu_11 | other | downstream | 122548 | 14382538 ~ 14382619 (+) | False | trnas-gcu_11 |
| trnas-gcu_13 | other | downstream | 124316 | 14384306 ~ 14384387 (+) | True | trnas-gcu_13 |
